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1 May 2019, Volume 10, Issue 5, pp. 2150-2673  
38 articles

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Brillouin Light Scattering Microspectroscopy for Biomedical Research and Applications: introduction to feature issue

Kareem Elsayad, Francesca Palombo, Thomas Dehoux, and Daniele Fioretto

Biomed. Opt. Express 10(5), 2670-2673 (2019)  View: HTML | PDF

Quantifying cellular forces and biomechanical properties by correlative micropillar traction force and Brillouin microscopy

Stefano Coppola, Thomas Schmidt, Giancarlo Ruocco, and Giuseppe Antonacci

Biomed. Opt. Express 10(5), 2202-2212 (2019)  View: HTML | PDF

New insights into the mechanical properties of Acanthamoeba castellanii cysts as revealed by phonon microscopy

Fernando Pérez-Cota, Richard J. Smith, Hany M. Elsheikha, and Matt Clark

Biomed. Opt. Express 10(5), 2399-2408 (2019)  View: HTML | PDF

Detection of proteoglycan loss from articular cartilage using Brillouin microscopy, with applications to osteoarthritis

Pei-Jung Wu, Maryam Imani Masouleh, Daniele Dini, Carl Paterson, Peter Török, Darryl R. Overby, and Irina V. Kabakova

Biomed. Opt. Express 10(5), 2457-2466 (2019)  View: HTML | PDF

Brillouin micro-spectroscopy of subchondral, trabecular bone and articular cartilage of the human femoral head

M. A. Cardinali, D. Dallari, M. Govoni, C. Stagni, F. Marmi, M. Tschon, S. Brogini, D. Fioretto, and A. Morresi

Biomed. Opt. Express 10(5), 2606-2611 (2019)  View: HTML | PDF

Editors' Pick

En face optical coherence tomography: a technology review [Invited]

R. A. Leitgeb

Biomed. Opt. Express 10(5), 2177-2201 (2019)  View: HTML | PDF

OCT-elastography-based optical biopsy for breast cancer delineation and express assessment of morphological/molecular subtypes

Ekaterina V. Gubarkova, Alexander A. Sovetsky, Vladimir Yu. Zaitsev, Alexander L. Matveyev, Dmitry A. Vorontsov, Marina A. Sirotkina, Lev A. Matveev, Anton A. Plekhanov, Nadezhda P. Pavlova, Sergei S. Kuznetsov, Alexey Yu. Vorontsov, Elena V. Zagaynova, and Natalia D. Gladkova

Biomed. Opt. Express 10(5), 2244-2263 (2019)  View: HTML | PDF

Improving DOT reconstruction with a Born iterative method and US-guided sparse regularization

Shiqi Xu, K. M. Shihab Uddin, and Quing Zhu

Biomed. Opt. Express 10(5), 2528-2541 (2019)  View: HTML | PDF

Miniaturized omnidirectional flexible side-view endoscope for rapid monitoring of thin tubular biostructures

Bjorn Paulson, SangHwa Lee, Youngkyu Kim, Youngjin Moon, and Jun Ki Kim

Biomed. Opt. Express 10(5), 2264-2274 (2019)  View: HTML | PDF

Multimodal endoscopic system based on multispectral and photometric stereo imaging and analysis

Jihun Kim, Hasan Al Faruque, Sewoong Kim, Eunjoo Kim, and Jae Youn Hwang

Biomed. Opt. Express 10(5), 2289-2302 (2019)  View: HTML | PDF

Measurements on ATP induced cellular fluctuations using real-time dual view transport of intensity phase microscopy

Yanke Shan, Qingtao Gong, Jian Wang, Jing Xu, Qi Wei, Cheng Liu, Liang Xue, Shouyu Wang, and Fei Liu

Biomed. Opt. Express 10(5), 2337-2354 (2019)  View: HTML | PDF

Elastography of multicellular spheroids using 3D light microscopy

Devina Jaiswal, Zoe Moscato, Yuji Tomizawa, Kevin P. Claffey, and Kazunori Hoshino

Biomed. Opt. Express 10(5), 2409-2418 (2019)  View: HTML | PDF  [Suppl. Mat. (5)]

Moments reconstruction and local dynamic range compression of high order superresolution optical fluctuation imaging

Xiyu Yi, Sungho Son, Ryoko Ando, Atsushi Miyawaki, and Shimon Weiss

Biomed. Opt. Express 10(5), 2430-2445 (2019)  View: HTML | PDF  [Suppl. Mat. (13)]

Contrast improvement in two-photon microscopy with instantaneous differential aberration imaging

Sheng Xiao and Jerome Mertz

Biomed. Opt. Express 10(5), 2467-2477 (2019)  View: HTML | PDF

Spectral image scanning microscopy

Franziska Strasser, Martin Offterdinger, Rafael Piestun, and Alexander Jesacher

Biomed. Opt. Express 10(5), 2513-2527 (2019)  View: HTML | PDF

Multimodal endoscopy for colorectal cancer detection by optical coherence tomography and near-infrared fluorescence imaging

Yan Li, Zhikai Zhu, Jason J. Chen, Joseph C. Jing, Chung-Ho Sun, Sehwan Kim, Phil-Sang Chung, and Zhongping Chen

Biomed. Opt. Express 10(5), 2419-2429 (2019)  View: HTML | PDF

In vivo corneal confocal microscopy aided by optical coherence tomography

Sebastian Bohn, Karsten Sperlich, Heinrich Stolz, Rudolf F. Guthoff, and Oliver Stachs

Biomed. Opt. Express 10(5), 2580-2587 (2019)  View: HTML | PDF

On-line optical clearing method for whole-brain imaging in mice

Hao Wu, Xiaoquan Yang, Siqi Chen, Liuyun Zhang, Ben Long, Chaozhen Tan, Jing Yuan, and Hui Gong

Biomed. Opt. Express 10(5), 2612-2622 (2019)  View: HTML | PDF

LSPR-based cholesterol biosensor using a tapered optical fiber structure

Santosh Kumar, Brajesh Kumar Kaushik, Ragini Singh, Nan-Kuang Chen, Qing Shan Yang, Xia Zhang, Wenjun Wang, and Bingyuan Zhang

Biomed. Opt. Express 10(5), 2150-2160 (2019)  View: HTML | PDF

Phase-based OCT angiography in diagnostic imaging of pediatric retinoblastoma patients: abnormal blood vessels in post-treatment regression patterns

Oleg Nadiarnykh, Valentina Davidoiu, Maximilian G. O. Gräfe, Machteld Bosscha, Annette C. Moll, and Johannes F. de Boer

Biomed. Opt. Express 10(5), 2213-2226 (2019)  View: HTML | PDF  [Suppl. Mat. (1)]

Parallel detection of Jones-matrix elements in polarization-sensitive optical coherence tomography

Masahiro Yamanari, Sato Uematsu, Kenji Ishihara, and Yasushi Ikuno

Biomed. Opt. Express 10(5), 2318-2336 (2019)  View: HTML | PDF

Development of a clinical prototype of a miniature hand-held optical coherence tomography probe for prematurity and pediatric ophthalmic imaging

Shaozhen Song, Kanheng Zhou, Jing Jiang Xu, Qinqin Zhang, Shuyuan Lyu, and Ruikang Wang

Biomed. Opt. Express 10(5), 2383-2398 (2019)  View: HTML | PDF

Fully automated geometric feature analysis in optical coherence tomography angiography for objective classification of diabetic retinopathy

David Le, Minhaj Alam, Bernadette A. Miao, Jennifer I. Lim, and Xincheng Yao

Biomed. Opt. Express 10(5), 2493-2503 (2019)  View: HTML | PDF

Ergonomic handheld OCT angiography probe optimized for pediatric and supine imaging

Christian Viehland, Xi Chen, Du Tran-Viet, Moseph Jackson-Atogi, Pablo Ortiz, Gar Waterman, Lejla Vajzovic, Cynthia A. Toth, and Joseph A. Izatt

Biomed. Opt. Express 10(5), 2623-2638 (2019)  View: HTML | PDF

Joint retina segmentation and classification for early glaucoma diagnosis

Jie Wang, Zhe Wang, Fei Li, Guoxiang Qu, Yu Qiao, Hairong Lv, and Xiulan Zhang

Biomed. Opt. Express 10(5), 2639-2656 (2019)  View: HTML | PDF

Lung cancer diagnosis with quantitative DIC microscopy and a deep convolutional neural network

Longfei Zheng, Kangyuan Yu, Shuangshuang Cai, Yu Wang, Bixin Zeng, and Min Xu

Biomed. Opt. Express 10(5), 2446-2456 (2019)  View: HTML | PDF

Spectral complexity of 5-ALA induced PpIX fluorescence in guided surgery: a clinical study towards the discrimination of healthy tissue and margin boundaries in high and low grade gliomas

L. Alston, L. Mahieu-Williame, M. Hebert, P. Kantapareddy, D. Meyronet, D. Rousseau, J. Guyotat, and B. Montcel

Biomed. Opt. Express 10(5), 2478-2492 (2019)  View: HTML | PDF

Editors' Pick

Development of a flow cell based Raman spectroscopy technique to overcome photodegradation in human blood

Ben Hansson, Christian Harry Allen, Sami Qutob, Bradford Behr, Balazs Nyiri, Vinita Chauhan, and Sangeeta Murugkar

Biomed. Opt. Express 10(5), 2275-2288 (2019)  View: HTML | PDF

PA-Fuse: deep supervised approach for the fusion of photoacoustic images with distinct reconstruction characteristics

Navchetan Awasthi, K. Ram Prabhakar, Sandeep Kumar Kalva, Manojit Pramanik, R. Venkatesh Babu, and Phaneendra K. Yalavarthy

Biomed. Opt. Express 10(5), 2227-2243 (2019)  View: HTML | PDF

Classification of human ovarian cancer using functional, spectral, and imaging features obtained from in vivo photoacoustic imaging

Eghbal Amidi, Atahar Mostafa, Sreyankar Nandy, Guang Yang, William Middleton, Cary Siegel, and Quing Zhu

Biomed. Opt. Express 10(5), 2303-2317 (2019)  View: HTML | PDF

Photoacoustic computed tomography with lens-free focused fiber-laser ultrasound sensor

Xue Bai, Yumeng Qi, Yizhi Liang, Jun Ma, Long Jin, and Bai-ou Guan

Biomed. Opt. Express 10(5), 2504-2512 (2019)  View: HTML | PDF

Characterizing intestinal strictures of Crohn’s disease in vivo by endoscopic photoacoustic imaging

Hao Lei, Laura A. Johnson, Kathryn A. Eaton, Shengchun Liu, Jun Ni, Xueding Wang, Peter D. R. Higgins, and Guan Xu

Biomed. Opt. Express 10(5), 2542-2555 (2019)  View: HTML | PDF

Photoacoustic tomography for imaging the prostate: a transurethral illumination probe design and application

Min Ai, Jong-in Youn, Septimiu E. Salcudean, Robert Rohling, Purang Abolmaesumi, and Shuo Tang

Biomed. Opt. Express 10(5), 2588-2605 (2019)  View: HTML | PDF

Narrowband-autofluorescence imaging for bone analysis

Laure Fauch, Anni Palander, Hannah Dekker, Engelbert AJM Schulten, Arto Koistinen, Arja Kullaa, and Markku Keinänen

Biomed. Opt. Express 10(5), 2367-2382 (2019)  View: HTML | PDF

Accuracy and precision of tissue optical properties and hemodynamic parameters estimated by the BabyLux device: a hybrid time-resolved near-infrared and diffuse correlation spectroscopy neuro-monitor

Martina Giovannella, Lorenzo Spinelli, Marco Pagliazzi, Davide Contini, Gorm Greisen, Udo M. Weigel, Alessandro Torricelli, and Turgut Durduran

Biomed. Opt. Express 10(5), 2556-2579 (2019)  View: HTML | PDF

Self-calibrating time-resolved near infrared spectroscopy

Stanislaw Wojtkiewicz, Anna Gerega, Marta Zanoletti, Aleh Sudakou, Davide Contini, Adam Liebert, Turgut Durduran, and Hamid Dehghani

Biomed. Opt. Express 10(5), 2657-2669 (2019)  View: HTML | PDF

Numerical model of the inhomogeneous scattering by the human lens

Alexander Cuadrado, Luis Miguel Sanchez-Brea, Francisco Jose Torcal-Milla, Juan Antonio Quiroga, and Jose Antonio Gomez-Pedrero

Biomed. Opt. Express 10(5), 2161-2176 (2019)  View: HTML | PDF

Improved cGAN based linear lesion segmentation in high myopia ICGA images

Hongjiu Jiang, Xinjian Chen, Fei Shi, Yuhui Ma, Dehui Xiang, Lei Ye, Jinzhu Su, Zuoyong Li, Qiuying Chen, Yihong Hua, Xun Xu, Weifang Zhu, and Ying Fan

Biomed. Opt. Express 10(5), 2355-2366 (2019)  View: HTML | PDF

article thumbnail

Phase-based OCT angiography map of the retina of a pediatric patient with retinoblastoma. See Nadiarnykh et al. Biomedical Optics Express 10, 2213-2226 (2019).

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