10^th Anniversary of Biomedical Optics Express: editorial

Christoph K. Hitzenberger

Biomed. Opt. Express 11(1), 267-268 (2020)  View: HTML | PDF

In vivo imaging of cervical precancer using a low-cost and easy-to-use confocal microendoscope

Yubo Tang, Alex Kortum, Sonia G. Parra, Imran Vohra, Andrea Milbourne, Preetha Ramalingam, Paul A. Toscano, Kathleen M. Schmeler, and Rebecca R. Richards-Kortum

Biomed. Opt. Express 11(1), 269-280 (2020)  View: HTML | PDF

Smartphone epifluorescence microscopy for cellular imaging of fresh tissue in low-resource settings

Wenbin Zhu, Giacomo Pirovano, Patrick K. O’Neal, Cheng Gong, Nachiket Kulkarni, Christopher D. Nguyen, Christian Brand, Thomas Reiner, and Dongkyun Kang

Biomed. Opt. Express 11(1), 89-98 (2020)  View: HTML | PDF

Whole slide imaging system using deep learning-based automated focusing

Tathagato Rai Dastidar and Renu Ethirajan

Biomed. Opt. Express 11(1), 480-491 (2020)  View: HTML | PDF

Trans-pars-planar illumination enables a 200° ultra-wide field pediatric fundus camera for easy examination of the retina

Devrim Toslak, Felix Chau, Muhammet Kazim Erol, Changgeng Liu, R. V. Paul Chan, Taeyoon Son, and Xincheng Yao

Biomed. Opt. Express 11(1), 68-76 (2020)  View: HTML | PDF  [Suppl. Mat. (1)]

Axial plane single-molecule super-resolution microscopy of whole cells

Sha An, Karl Ferdinand Ziegler, Peiyi Zhang, Yu Wang, Tim Kwok, Fan Xu, Cheng Bi, Sandro Matosevic, Peng Yin, Tongcang Li, and Fang Huang

Biomed. Opt. Express 11(1), 461-479 (2020)  View: HTML | PDF

Implementation of the extended Kalman filter for determining the optical and geometrical properties of turbid layered media by time-resolved single distance measurements

Guido R. Baez, Héctor García, Dirk Grosenick, and Heidrun Wabnitz

Biomed. Opt. Express 11(1), 251-266 (2020)  View: HTML | PDF

How to define and optimize axial resolution in light-sheet microscopy: a simulation-based approach

Elena Remacha, Lars Friedrich, Julien Vermot, and Florian O. Fahrbach

Biomed. Opt. Express 11(1), 8-26 (2020)  View: HTML | PDF  [Suppl. Mat. (1)]

Multiplex protein-specific microscopy with ultraviolet surface excitation

Jiaming Guo, Camille Artur, Tasha Womack, Jason L. Eriksen, and David Mayerich

Biomed. Opt. Express 11(1), 99-108 (2020)  View: HTML | PDF

Monitoring the endocytosis of bovine serum albumin based on the fluorescence lifetime of small squaraine dye in living cells

Fangrui Lin, Pintu Das, Yihua Zhao, Binglin Shen, Rui Hu, Feifan Zhou, Liwei Liu, and Junle Qu

Biomed. Opt. Express 11(1), 149-159 (2020)  View: HTML | PDF

Intensity-based registration of bright-field and second-harmonic generation images of histopathology tissue sections

Adib Keikhosravi, Bin Li, Yuming Liu, and Kevin W. Eliceiri

Biomed. Opt. Express 11(1), 160-173 (2020)  View: HTML | PDF  [Suppl. Mat. (1)]

Multiphoton microscopy of the dermoepidermal junction and automated identification of dysplastic tissues with deep learning

Mikko J. Huttunen, Radu Hristu, Adrian Dumitru, Iustin Floroiu, Mariana Costache, and Stefan G. Stanciu

Biomed. Opt. Express 11(1), 186-199 (2020)  View: HTML | PDF

Digital refocusing and extended depth of field reconstruction in Fourier ptychographic microscopy

Remy Claveau, Petru Manescu, Muna Elmi, Vijay Pawar, Michael Shaw, and Delmiro Fernandez-Reyes

Biomed. Opt. Express 11(1), 215-226 (2020)  View: HTML | PDF

High-throughput fluorescence microscopy using multi-frame motion deblurring

Zachary F. Phillips, Sarah Dean, Benjamin Recht, and Laura Waller

Biomed. Opt. Express 11(1), 281-300 (2020)  View: HTML | PDF

New luminescence lifetime macro-imager based on a Tpx3Cam optical camera

Rajannya Sen, Liisa M. Hirvonen, Alexander Zhdanov, Peter Svihra, Stefan Andersson-Engels, Andrei Nomerotski, and Dmitri Papkovsky

Biomed. Opt. Express 11(1), 77-88 (2020)  View: HTML | PDF

Vertically integrated photo junction-field-effect transistor pixels for retinal prosthesis

Samir Damle, Yu-Hsin Liu, Shaurya Arya, Nicholas W. Oesch, and Yu-Hwa Lo

Biomed. Opt. Express 11(1), 55-67 (2020)  View: HTML | PDF

Potential of sub-microsecond laser pulse shaping for controlling microcavitation in selective retinal therapies

Pascal Deladurantaye, Sébastien Méthot, Ozzy Mermut, Pierre Galarneau, and Patrick J Rochette

Biomed. Opt. Express 11(1), 109-132 (2020)  View: HTML | PDF

Wearable respiration monitoring using an in-line few-mode fiber Mach-Zehnder interferometric sensor

Ruihang Wang, Jing Zhao, Ye Sun, Hui Yu, Ning Zhou, Hongxia Zhang, and Dagong Jia

Biomed. Opt. Express 11(1), 316-329 (2020)  View: HTML | PDF

Gabor optical coherence tomographic angiography (GOCTA) (Part II): theoretical basis of sensitivity improvement and optimization for processing speed

Chaoliang Chen, Weisong Shi, Joel Ramjist, and Victor X. D. Yang

Biomed. Opt. Express 11(1), 227-239 (2020)  View: HTML | PDF

Robust non-perfusion area detection in three retinal plexuses using convolutional neural network in OCT angiography

Jie Wang, Tristan T. Hormel, Qisheng You, Yukun Guo, Xiaogang Wang, Liu Chen, Thomas S. Hwang, and Yali Jia

Biomed. Opt. Express 11(1), 330-345 (2020)  View: HTML | PDF

Reducing image variability across OCT devices with unsupervised unpaired learning for improved segmentation of retina

David Romo-Bucheli, Philipp Seeböck, José Ignacio Orlando, Bianca S. Gerendas, Sebastian M. Waldstein, Ursula Schmidt-Erfurth, and Hrvoje Bogunović

Biomed. Opt. Express 11(1), 346-363 (2020)  View: HTML | PDF

High-resolution in-vivo human retinal imaging using full-field OCT with optical stabilization of axial motion

Pedro Mecê, Jules Scholler, Kassandra Groux, and Claude Boccara

Biomed. Opt. Express 11(1), 492-504 (2020)  View: HTML | PDF  [Suppl. Mat. (5)]

Context-free hyperspectral image enhancement for wide-field optical biomarker visualization

Arturo Pardo, José A. Gutiérrez-Gutiérrez, José M. López-Higuera, and Olga M. Conde

Biomed. Opt. Express 11(1), 133-148 (2020)  View: HTML | PDF

Irradiance plays a significant role in photobiomodulation of B16F10 melanoma cells by increasing reactive oxygen species and inhibiting mitochondrial function

Zeqing Chen, Wenqi Li, Xiaojian Hu, and Muqing Liu

Biomed. Opt. Express 11(1), 27-39 (2020)  View: HTML | PDF

Cavitation induced by shock wave focusing in eye-like experimental configurations

Tomaž Požar and Rok Petkovšek

Biomed. Opt. Express 11(1), 432-447 (2020)  View: HTML | PDF

Complete-noncontact photoacoustic microscopy by detection of initial pressures using a 3×3 coupler-based fiber-optic interferometer

Yi Wang, Yingxin Hu, Binyang Peng, Hongxian Zhou, Yuqian Zhao, and Zhenhe Ma

Biomed. Opt. Express 11(1), 505-516 (2020)  View: HTML | PDF

Characterization of volatile organic compounds (VOCs) in their liquid-phase by terahertz time-domain spectroscopy

Annalisa D’Arco, Marta Di Fabrizio, Valerio Dolci, Augusto Marcelli, Massimo Petrarca, Giancarlo Della Ventura, and Stefano Lupi

Biomed. Opt. Express 11(1), 1-7 (2020)  View: HTML | PDF

Identifying different types of microorganisms with terahertz spectroscopy

S. A. Yoon, S. H. Cha, S. W. Jun, S. J. Park, J.-Y. Park, S. Lee, H. S. Kim, and Y. H. Ahn

Biomed. Opt. Express 11(1), 406-416 (2020)  View: HTML | PDF

Computational absorption and reflection studies of normal human skin at 0.45 THz

Zoltan Vilagosh, Alireza Lajevardipour, and Andrew W. Wood

Biomed. Opt. Express 11(1), 417-431 (2020)  View: HTML | PDF

Denoising Raman spectra by Wiener estimation with a numerical calibration dataset

Yanru Bai and Quan Liu

Biomed. Opt. Express 11(1), 200-214 (2020)  View: HTML | PDF

Instrument response function acquisition in reflectance geometry for time-resolved diffuse optical measurements

Ileana Pirovano, Rebecca Re, Alessia Candeo, Davide Contini, Alessandro Torricelli, and Lorenzo Spinelli

Biomed. Opt. Express 11(1), 240-250 (2020)  View: HTML | PDF

Enhancement of diffuse correlation spectroscopy tissue blood flow measurement by acoustic radiation force

Hao Ling, Zhiguo Gui, Huiyan Hao, and Yu Shang

Biomed. Opt. Express 11(1), 301-315 (2020)  View: HTML | PDF

Discrimination of radiosensitive and radioresistant murine lymphoma cells by Raman spectroscopy and SERS

Iris Aguilar-Hernández, Diana L. Cárdenas-Chavez, Tzarara López-Luke, Alejandra García-García, Marcela Herrera-Domínguez, Eduardo Pisano, and Nancy Ornelas-Soto

Biomed. Opt. Express 11(1), 388-405 (2020)  View: HTML | PDF

Model of the light sword intraocular lens: in-vitro comparative studies

Krzysztof Petelczyc, Andrzej Kolodziejczyk, Narcyz Błocki, Anna Byszewska, Zbigniew Jaroszewicz, Karol Kakarenko, Katarzyna Kołacz, Michał Miler, Alejandro Mira-Agudelo, Walter Torres-Sepúlveda, and Marek Rękas

Biomed. Opt. Express 11(1), 40-54 (2020)  View: HTML | PDF  [Suppl. Mat. (11)]

Three-dimensional visualization of microvasculature from few-projection data using a novel CT reconstruction algorithm for propagation-based X-ray phase-contrast imaging

Yuqing Zhao, Dongjiang Ji, Yimin Li, Xinyan Zhao, Wenjuan Lv, Xiaohong Xin, Shuo Han, and Chunhong Hu

Biomed. Opt. Express 11(1), 364-387 (2020)  View: HTML | PDF  [Suppl. Mat. (2)]