1 December 2021, Volume 12, Issue 12, pp. 7280-7927  
44 articles

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Classification of two species of Gram-positive bacteria through hyperspectral microscopy coupled with machine learning

Biomed. Opt. Express 12(12), 7906-7916 (2021)  View: HTML | PDF

Performance assessment of MRI guided continuous wave near-infrared spectral tomography for breast imaging

Biomed. Opt. Express 12(12), 7657-7672 (2021)  View: HTML | PDF

L1-L2 norm regularization via forward-backward splitting for fluorescence molecular tomography

Biomed. Opt. Express 12(12), 7807-7825 (2021)  View: HTML | PDF

Simultaneous scattering compensation at multiple points in multi-photon microscopy

Biomed. Opt. Express 12(12), 7377-7387 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Editors' Pick

Deep learning 2D and 3D optical sectioning microscopy using cross-modality Pix2Pix cGAN image translation

Biomed. Opt. Express 12(12), 7526-7543 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Improved resolution in 3D structured illumination microscopy using 3D model-based restoration with positivity-constraint

Biomed. Opt. Express 12(12), 7717-7731 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Shot-noise limited tunable dual-vibrational frequency stimulated Raman scattering microscopy

Biomed. Opt. Express 12(12), 7780-7789 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Real-time vascular and IgA dynamics during Henoch–Schönlein purpura by in vivo fluorescent microscopy

Biomed. Opt. Express 12(12), 7826-7834 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Intravital two-photon imaging and quantification of hepatic steatosis and fibrosis in a live small animal model

Biomed. Opt. Express 12(12), 7918-7927 (2021)  View: HTML | PDF

Editors' Pick

Detection of carbamazepine in saliva based on surface-enhanced Raman spectroscopy

Biomed. Opt. Express 12(12), 7673-7688 (2021)  View: HTML | PDF

Self-synchronized reflection-mode acousto-optic imaging system utilizing nanosecond laser pulses

Biomed. Opt. Express 12(12), 7297-7314 (2021)  View: HTML | PDF

Attention mechanism-based locally connected network for accurate and stable reconstruction in Cerenkov luminescence tomography

Biomed. Opt. Express 12(12), 7703-7716 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Monte Carlo analysis of optical heart rate sensors in commercial wearables: the effect of skin tone and obesity on the photoplethysmography (PPG) signal

Biomed. Opt. Express 12(12), 7445-7457 (2021)  View: HTML | PDF

Effect of NIR light on the permeability of the blood-brain barriers in in vitro models

Biomed. Opt. Express 12(12), 7544-7555 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Phototoxicity induced in living HeLa cells by focused femtosecond laser pulses: a data-driven approach

Biomed. Opt. Express 12(12), 7886-7905 (2021)  View: HTML | PDF

Vernier effect assisted sucrose sensor based on a cascaded Sagnac interferometer with no-core fiber

Biomed. Opt. Express 12(12), 7338-7347 (2021)  View: HTML | PDF

Towards a portable-noninvasive blood pressure monitoring system utilizing the photoplethysmogram signal

Biomed. Opt. Express 12(12), 7732-7751 (2021)  View: HTML | PDF

Deep learning-based method for the continuous detection of heart rate in signals from a multi-fiber Bragg grating sensor compatible with magnetic resonance imaging

Biomed. Opt. Express 12(12), 7790-7806 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Quantitative compressive optical coherence elastography using structural OCT imaging and optical palpation to measure soft contact lens mechanical properties

Biomed. Opt. Express 12(12), 7315-7326 (2021)  View: HTML | PDF

Extended focal depth Fourier domain optical coherence microscopy with a Bessel-beam – LP02 mode – from a higher order mode fiber

Biomed. Opt. Express 12(12), 7327-7337 (2021)  View: HTML | PDF

Multi-task learning approach for volumetric segmentation and reconstruction in 3D OCT images

Biomed. Opt. Express 12(12), 7348-7360 (2021)  View: HTML | PDF

Robotically aligned optical coherence tomography with 5 degree of freedom eye tracking for subject motion and gaze compensation

Biomed. Opt. Express 12(12), 7361-7376 (2021)  View: HTML | PDF  [Suppl. Mat. (2)]

Glaucoma classification in 3 x 3 mm en face macular scans using deep learning in different plexus

Biomed. Opt. Express 12(12), 7434-7444 (2021)  View: HTML | PDF

Investigation of multiple scattering in space and spatial-frequency domains: with application to the analysis of aberration-diverse optical coherence tomography

Biomed. Opt. Express 12(12), 7478-7499 (2021)  View: HTML | PDF  [Suppl. Mat. (5)]

Stent detection with very thick tissue coverage in intravascular OCT

Biomed. Opt. Express 12(12), 7500-7516 (2021)  View: HTML | PDF

Simulating scan formation in multimodal optical coherence tomography: angular-spectrum formulation based on ballistic scattering of arbitrary-form beams

Biomed. Opt. Express 12(12), 7599-7615 (2021)  View: HTML | PDF

Automatic correction of the initial rotation angle error improves 3D reconstruction in endoscopic airway optical coherence tomography

Biomed. Opt. Express 12(12), 7616-7631 (2021)  View: HTML | PDF

Deep imaging with 1.3 µm dual-axis optical coherence tomography and an enhanced depth of focus

Biomed. Opt. Express 12(12), 7689-7702 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Extraction of phase-based optoretinograms (ORG) from serial B-scans acquired over tens of seconds by mouse retinal raster scanning OCT system

Biomed. Opt. Express 12(12), 7849-7871 (2021)  View: HTML | PDF  [Suppl. Mat. (2)]

Photoplethysmographic analysis of retinal videodata based on the Fourier domain approach

Biomed. Opt. Express 12(12), 7405-7421 (2021)  View: HTML | PDF  [Suppl. Mat. (3)]

Intraoperative colon perfusion assessment using multispectral imaging

Biomed. Opt. Express 12(12), 7556-7567 (2021)  View: HTML | PDF

Spotlight on Optics

Intelligent smartphone-based multimode imaging otoscope for the mobile diagnosis of otitis media

Biomed. Opt. Express 12(12), 7765-7779 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Blood identification at the single-cell level based on a combination of laser tweezers Raman spectroscopy and machine learning

Biomed. Opt. Express 12(12), 7568-7581 (2021)  View: HTML | PDF

Morphology-dependent resonance enhanced nonlinear photoacoustic effect in nanoparticle suspension: a temporal-spatial model

Biomed. Opt. Express 12(12), 7280-7296 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Wavelength and pulse energy optimization for detecting hypoxia in photoacoustic imaging of the neonatal brain: a simulation study

Biomed. Opt. Express 12(12), 7458-7477 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Compressed sensing for photoacoustic computed tomography based on an untrained neural network with a shape prior

Biomed. Opt. Express 12(12), 7835-7848 (2021)  View: HTML | PDF

Optical property recovery with spatially-resolved diffuse reflectance at short source-detector separations using a compact fiber-optic probe

Biomed. Opt. Express 12(12), 7388-7404 (2021)  View: HTML | PDF

Determination of best Raman spectroscopy spatial offsets for transcutaneous bone quality assessments in human hands

Biomed. Opt. Express 12(12), 7517-7525 (2021)  View: HTML | PDF

Quantification of cytochrome c oxidase and tissue oxygenation using CW-NIRS in a mouse cerebral cortex

Biomed. Opt. Express 12(12), 7632-7656 (2021)  View: HTML | PDF

Simultaneous measurements of foveal and peripheral aberrations with accommodation in myopic and emmetropic eyes

Biomed. Opt. Express 12(12), 7422-7433 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Pupil steering holographic display for pre-operative vision screening of cataracts

Biomed. Opt. Express 12(12), 7752-7764 (2021)  View: HTML | PDF

Birefringent properties of the cornea measured by a Mueller type polarimeter in healthy adults and children

Biomed. Opt. Express 12(12), 7872-7885 (2021)  View: HTML | PDF

Three-dimensional virtual histology of the cerebral cortex based on phase-contrast X-ray tomography

Biomed. Opt. Express 12(12), 7582-7598 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Multimodal microscopy for the simultaneous visualization of five different imaging modalities using a single light source: publisher’s note

Biomed. Opt. Express 12(12), 7917-7917 (2021)  View: HTML | PDF