Durable 3D murine ex vivo retina glaucoma models for optical coherence tomography

Álvaro Barroso, Steffi Ketelhut, Gerburg Nettels-Hackert, Peter Heiduschka, Rocío del Amor, Valery Naranjo, Björn Kemper, and Jürgen Schnekenburger

Biomed. Opt. Express 14(9), 4421-4438 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Optical beam scanner with reconfigurable non-mechanical control of beam position, angle, and focus for low-cost whole-eye OCT imaging

María Pilar Urizar, Enrique Gambra, Alberto de Castro, Álvaro de la Peña, Onur Cetinkaya, Susana Marcos, and Andrea Curatolo

Biomed. Opt. Express 14(9), 4468-4484 (2023)  View: HTML | PDF  [Suppl. Mat. (6)]

OCT angiography and its retinal biomarkers [Invited]

Tristan T. Hormel and Yali Jia

Biomed. Opt. Express 14(9), 4542-4566 (2023)  View: HTML | PDF

Multi-focus averaging for multiple scattering suppression in optical coherence tomography

Lida Zhu, Shuichi Makita, Junya Tamaoki, Antonia Lichtenegger, Yiheng Lim, Yiqiang Zhu, Makoto Kobayashi, and Yoshiaki Yasuno

Biomed. Opt. Express 14(9), 4828-4844 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Comparative analysis of full-field OCT and optical transmission tomography

Samer Alhaddad, Olivier Thouvenin, Martine Boccara, Claude Boccara, and Viacheslav Mazlin

Biomed. Opt. Express 14(9), 4845-4861 (2023)  View: HTML | PDF  [Suppl. Mat. (4)]

Possible depth-resolved reconstruction of shear moduli in the cornea following collagen crosslinking (CXL) with optical coherence tomography and elastography

Gabriel Regnault, Mitchell A. Kirby, Ruikang K. Wang, Tueng T. Shen, Matthew O’Donnell, and Ivan Pelivanov

Biomed. Opt. Express 14(9), 5005-5021 (2023)  View: HTML | PDF  [Suppl. Mat. (3)]

Non-invasive in vivo imaging of human corneal microstructures with optical coherence microscopy

Hadiya F. Pattan, Xiao Liu, and Patrice Tankam

Biomed. Opt. Express 14(9), 4888-4900 (2023)  View: HTML | PDF

Design and validation of a convolutional neural network for fast, model-free blood flow imaging with multiple exposure speckle imaging

Chao-Yueh Yu, Marc Chammas, Hirac Gurden, Hsin-Hon Lin, and Frédéric Pain

Biomed. Opt. Express 14(9), 4439-4454 (2023)  View: HTML | PDF  [Suppl. Mat. (2)]

Asymmetric split-ring plasmonic nanostructures for the optical sensing of Escherichia coli

Domna G. Kotsifaki, Ranjan Rajiv Singh, Síle Nic Chormaic, and Viet Giang Truong

Biomed. Opt. Express 14(9), 4875-4887 (2023)  View: HTML | PDF

Measurement of red blood cell deformability during morphological changes using rotating-glass-plate-based scanning optical tweezers

Rui Liu, Meng Shao, Zeyu Ke, Changxu Li, Fengya Lu, Min-Cheng Zhong, Yuxin Mao, Xunbin Wei, Zhensheng Zhong, and Jinhua Zhou

Biomed. Opt. Express 14(9), 4979-4989 (2023)  View: HTML | PDF

Unleashing the power of optical attenuation coefficients to facilitate segmentation strategies in OCT imaging of age-related macular degeneration: perspective

Philip J. Rosenfeld, Yuxuan Cheng, Mengxi Shen, Giovanni Gregori, and Ruikang K. Wang

Biomed. Opt. Express 14(9), 4947-4963 (2023)  View: HTML | PDF

Hybrid machine-learning framework for volumetric segmentation and quantification of vacuoles in individual yeast cells using holotomography

Moosung Lee, Marina Kunzi, Gabriel Neurohr, Sung Sik Lee, and YongKeun Park

Biomed. Opt. Express 14(9), 4567-4578 (2023)  View: HTML | PDF

Lightweight deep learning model incorporating an attention mechanism and feature fusion for automatic classification of gastric lesions in gastroscopic images

Lingxiao Wang, Yingyun Yang, Aiming Yang, and Ting Li

Biomed. Opt. Express 14(9), 4677-4695 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Optimizing the OCTA layer fusion option for deep learning classification of diabetic retinopathy

Behrouz Ebrahimi, David Le, Mansour Abtahi, Albert K. Dadzie, Jennifer I. Lim, R. V. Paul Chan, and Xincheng Yao

Biomed. Opt. Express 14(9), 4713-4724 (2023)  View: HTML | PDF

CCS-UNet: a cross-channel spatial attention model for accurate retinal vessel segmentation

Yong-fei Zhu, Xiang Xu, Xue-dian Zhang, and Min-shan Jiang

Biomed. Opt. Express 14(9), 4739-4758 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Three-dimensional oxygen concentration monitoring in hydrogels using low-cost phosphorescence lifetime imaging for tissue engineering

Xu Mei, Qiyin Fang, and P. Ravi Selvaganapathy

Biomed. Opt. Express 14(9), 4759-4774 (2023)  View: HTML | PDF

LED array microscopy system correction method with comprehensive error parameters optimized by phase smoothing criterion

Zewen Yang, Lu Zhang, Tong Liu, Haoyu Wu, Zhiyuan Tang, Chen Fan, Xiaolong Liu, Zhenxi Zhang, and Hong Zhao

Biomed. Opt. Express 14(9), 4696-4712 (2023)  View: HTML | PDF

Measurements of slow tissue dynamics with short-separation speckle contrast optical spectroscopy

Bingxue Liu, Shashwat Shah, Gülce Küreli, Anna Devor, David A. Boas, and Xiaojun Cheng

Biomed. Opt. Express 14(9), 4790-4799 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

AutoUnmix: an autoencoder-based spectral unmixing method for multi-color fluorescence microscopy imaging

Yuan Jiang, Hao Sha, Shuai Liu, Peiwu Qin, and Yongbing Zhang

Biomed. Opt. Express 14(9), 4814-4827 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Imaging and quantification of the tumor microenvironment of triple negative breast cancer using TPEF and scanning laser optical tomography

Hannes Kamin, Lena Nolte, Andreas Bleilevens, Elmar Stickeler, Dag Heinemann, Jochen Maurer, Sonja Johannsmeier, and Tammo Ripken

Biomed. Opt. Express 14(9), 4579-4593 (2023)  View: HTML | PDF

Imaging and component analysis of pumpkin stem tissue with simultaneous SF-CARS and TPEF microscopy

Guozhong Hou, Zhiwei Dong, Yifan Qin, Ze Zhang, Meng Liu, and Yuanqin Xia

Biomed. Opt. Express 14(9), 4862-4874 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Measuring intraocular pressure with OCT: the first approach

Marcela Niemczyk and D. Robert Iskander

Biomed. Opt. Express 14(9), 4531-4541 (2023)  View: HTML | PDF

Automatic 3D reconstruction of an anatomically correct upper airway from endoscopic long range OCT images

Zhijian Zhuang, Delang Chen, Zhichao Liang, Shuangyang Zhang, Zhenyang Liu, Wufan Chen, and Li Qi

Biomed. Opt. Express 14(9), 4594-4608 (2023)  View: HTML | PDF

Single-input polarization-sensitive optical coherence tomography through a catheter

Georgia L. Jones, Qiaozhou Xiong, Xinyu Liu, Brett E. Bouma, and Martin Villiger

Biomed. Opt. Express 14(9), 4609-4626 (2023)  View: HTML | PDF  [Suppl. Mat. (2)]

Analysis of volumetric 3D reconstruction of lamina cribrosa images from swept-source optical coherence tomography in glaucomatous and healthy subjects

Jutamash Wongwai, Prathan Buranasiri, Kitsuchart Pasupa, and Anita Manassakorn

Biomed. Opt. Express 14(9), 4627-4643 (2023)  View: HTML | PDF

Non-invasive method for assessment of inflammation

I. Fine, A. Kaminsky, L. Shenkman, and M. Agbaria

Biomed. Opt. Express 14(9), 4901-4913 (2023)  View: HTML | PDF

Development and performance validation of a low-cost algorithms-based hyperspectral imaging system for radiodermatitis assessment

Shicheng Hao, Ying Xiong, Sisi Guo, Jing Gao, Xiaotong Chen, Ruoyu Zhang, Lihui Liu, and Jianfeng Wang

Biomed. Opt. Express 14(9), 4990-5004 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Noninvasive measurement of local temperature using ultrasound-switchable fluorescence

Liqin Ren, Tingfeng Yao, Kytai T. Nguyen, and Baohong Yuan

Biomed. Opt. Express 14(9), 4406-4420 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

On-line clearing and staining method for the efficient optical imaging of large volume samples at the cellular resolution

Yunfei Zhang, Guangcai Liu, Xiangning Li, Hui Gong, Qingming Luo, and Xiaoquan Yang

Biomed. Opt. Express 14(9), 4800-4813 (2023)  View: HTML | PDF

Long-term assessment of cutaneous inflammation and treatment using optical resolution photoacoustic microscopy

Yuanlong Zhao, Tingting Li, Heng Guo, Rui Hu, and Lei Xi

Biomed. Opt. Express 14(9), 4775-4789 (2023)  View: HTML | PDF

Intraoperative laparoscopic photoacoustic image guidance system in the da Vinci surgical system

Shang Gao, Yang Wang, Xihan Ma, Haoying Zhou, Yiwei Jiang, Kehan Yang, Liang Lu, Shiyue Wang, Benjamin C. Nephew, Loris Fichera, Gregory S. Fischer, and Haichong K. Zhang

Biomed. Opt. Express 14(9), 4914-4928 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Using cross-correlation analysis of multi-channel near infrared spectroscopy to assess the hemodynamic response to cupping therapy

Ben-Yi Liau, Chi-Wen Lung, Manuel E. Hernandez, Pu-Chun Mo, Yameng Li, Jiaqi Guo, and Yih-Kuen Jan

Biomed. Opt. Express 14(9), 4455-4467 (2023)  View: HTML | PDF

Design and characterization of color printed polyurethane films as biomedical phantom layers

Claudia F. Morsink, Alida J. Dam-Vervloet, Marleen E. Krommendijk, Michael Kaya, Carlos Cuartas-Vélez, Tom Knop, Kalloor Joseph Francis, and Nienke Bosschaart

Biomed. Opt. Express 14(9), 4485-4506 (2023)  View: HTML | PDF

Non-contact measurement of neck pulses achieved by imaging micro-motions in the neck skin

Qinghua He, Wenqian Geng, Wanyu Li, and Ruikang K. Wang

Biomed. Opt. Express 14(9), 4507-4519 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Importance sampling-accelerated simulation of full-spectrum backscattered diffuse reflectance

Jianing Mao, Yuye Ling, Ping Xue, and Yikai Su

Biomed. Opt. Express 14(9), 4644-4659 (2023)  View: HTML | PDF

Neural network-based inverse model for diffuse reflectance spectroscopy

Qing Lan, Ryan G. McClarren, and Karthik Vishwanath

Biomed. Opt. Express 14(9), 4725-4738 (2023)  View: HTML | PDF  [Suppl. Mat. (12)]

SpeCamX: mobile app that turns unmodified smartphones into multispectral imagers

Qinghua He, Wanyu Li, Yaping Shi, Yi Yu, Wenqian Geng, Zhiyuan Sun, and Ruikang K. Wang

Biomed. Opt. Express 14(9), 4929-4946 (2023)  View: HTML | PDF  [Suppl. Mat. (4)]