Continuing the success of Biomedical Optics Express: editorial

Christoph K. Hitzenberger and Adam Gibson

Biomed. Opt. Express 7(2), 420-421 (2016)  View: HTML | PDF

Light controlled drug delivery containers based on spiropyran doped liquid crystal micro spheres

Gia Petriashvili, Lali Devadze, Tsisana Zurabishvili, Nino Sepashvili, and Ketevan Chubinidze

Biomed. Opt. Express 7(2), 442-447 (2016)  View: HTML | PDF

U-shaped, double-tapered, fiber-optic sensor for effective biofilm growth monitoring

Nianbing Zhong, Mingfu Zhao, and Yishan Li

Biomed. Opt. Express 7(2), 335-351 (2016)  View: HTML | PDF

Frapid: achieving full automation of FRAP for chemical probe validation

Clarence Yapp, Catherine Rogers, Pavel Savitsky, Martin Philpott, and Susanne Müller

Biomed. Opt. Express 7(2), 422-441 (2016)  View: HTML | PDF

Scanning, non-contact, hybrid broadband diffuse optical spectroscopy and diffuse correlation spectroscopy system

Johannes D. Johansson, Miguel Mireles, Jordi Morales-Dalmau, Parisa Farzam, Mar Martínez-Lozano, Oriol Casanovas, and Turgut Durduran

Biomed. Opt. Express 7(2), 481-498 (2016)  View: HTML | PDF

Lock-in-photon-counting-based highly-sensitive and large-dynamic imaging system for continuous-wave diffuse optical tomography

Weiting Chen, Xin Wang, Bingyuan Wang, Yihan Wang, Yanqi Zhang, Huijuan Zhao, and Feng Gao

Biomed. Opt. Express 7(2), 499-511 (2016)  View: HTML | PDF

Spectral imaging using forward-viewing spectrally encoded endoscopy

Adel Zeidan and Dvir Yelin

Biomed. Opt. Express 7(2), 392-398 (2016)  View: HTML | PDF  [Suppl. Mat. (4)]

Miniature in vivo MEMS-based line-scanned dual-axis confocal microscope for point-of-care pathology

C. Yin, A.K. Glaser, S. Y. Leigh, Y. Chen, L. Wei, P. C. S. Pillai, M. C. Rosenberg, S. Abeytunge, G. Peterson, C. Glazowski, N. Sanai, M. J. Mandella, M. Rajadhyaksha, and J. T. C. Liu

Biomed. Opt. Express 7(2), 251-263 (2016)  View: HTML | PDF  [Suppl. Mat. (3)]

Visualization of podocyte substructure with structured illumination microscopy (SIM): a new approach to nephrotic disease

James M. Pullman, Jonathan Nylk, Elaine C. Campbell, Frank J. Gunn-Moore, Michael B. Prystowsky, and Kishan Dholakia

Biomed. Opt. Express 7(2), 302-311 (2016)  View: HTML | PDF

Wide field-of-view fluorescence image deconvolution with aberration-estimation from Fourier ptychography

Jaebum Chung, Jinho Kim, Xiaoze Ou, Roarke Horstmeyer, and Changhuei Yang

Biomed. Opt. Express 7(2), 352-368 (2016)  View: HTML | PDF

Fast interferometric second harmonic generation microscopy

Stéphane Bancelin, Charles-André Couture, Katherine Légaré, Maxime Pinsard, Maxime Rivard, Cameron Brown, and François Légaré

Biomed. Opt. Express 7(2), 399-408 (2016)  View: HTML | PDF

Assessing the imaging performance of light sheet microscopies in highly scattering tissues

A. K. Glaser, Y. Wang, and J. T.C. Liu

Biomed. Opt. Express 7(2), 454-466 (2016)  View: HTML | PDF

Model-free uncertainty estimation in stochastical optical fluctuation imaging (SOFI) leads to a doubled temporal resolution

Wim Vandenberg, Sam Duwé, Marcel Leutenegger, Benjamien Moeyaert, Bartosz Krajnik, Theo Lasser, and Peter Dedecker

Biomed. Opt. Express 7(2), 467-480 (2016)  View: HTML | PDF

Dynamics of cell and tissue growth acquired by means of extended field of view lensfree microscopy

F. Momey, J.-G. Coutard, T. Bordy, F. Navarro, M. Menneteau, J.-M. Dinten, and C. Allier

Biomed. Opt. Express 7(2), 512-524 (2016)  View: HTML | PDF  [Suppl. Mat. (5)]

Functional second harmonic generation microscopy probes molecular dynamics with high temporal resolution

Moritz Förderer, Tihomir Georgiev, Matias Mosqueira, Rainer H. A. Fink, and Martin Vogel

Biomed. Opt. Express 7(2), 525-541 (2016)  View: HTML | PDF

Second harmonic generation double stokes Mueller polarimetric microscopy of myofilaments

Lukas Kontenis, Masood Samim, Abiramy Karunendiran, Serguei Krouglov, Bryan Stewart, and Virginijus Barzda

Biomed. Opt. Express 7(2), 559-569 (2016)  View: HTML | PDF

Comparison of reflectance confocal microscopy and two-photon second harmonic generation microscopy in fungal keratitis rabbit model ex vivo

Jun Ho Lee, Seunghun Lee, Calvin J. Yoon, Jin Hyoung Park, Hungwon Tchah, Myoung Joon Kim, and Ki Hean Kim

Biomed. Opt. Express 7(2), 677-687 (2016)  View: HTML | PDF  [Suppl. Mat. (10)]

Investigation of middle ear anatomy and function with combined video otoscopy-phase sensitive OCT

Jesung Park, Jeffrey T. Cheng, Daniel Ferguson, Gopi Maguluri, Ernest W. Chang, Caitlin Clancy, Daniel J. Lee, and Nicusor Iftimia

Biomed. Opt. Express 7(2), 238-250 (2016)  View: HTML | PDF

Total retinal blood flow measurement by three beam Doppler optical coherence tomography

Richard Haindl, Wolfgang Trasischker, Andreas Wartak, Bernhard Baumann, Michael Pircher, and Christoph K. Hitzenberger

Biomed. Opt. Express 7(2), 287-301 (2016)  View: HTML | PDF

Automated segmentation and characterization of esophageal wall in vivo by tethered capsule optical coherence tomography endomicroscopy

Giovanni J. Ughi, Michalina J. Gora, Anne-Fré Swager, Amna Soomro, Catriona Grant, Aubrey Tiernan, Mireille Rosenberg, Jenny S. Sauk, Norman S. Nishioka, and Guillermo J. Tearney

Biomed. Opt. Express 7(2), 409-419 (2016)  View: HTML | PDF

Automated geographic atrophy segmentation for SD-OCT images using region-based C-V model via local similarity factor

Sijie Niu, Luis de Sisternes, Qiang Chen, Theodore Leng, and Daniel L. Rubin

Biomed. Opt. Express 7(2), 581-600 (2016)  View: HTML | PDF

Fully distributed absolute blood flow velocity measurement for middle cerebral arteries using Doppler optical coherence tomography

Li Qi, Jiang Zhu, Aneeka M. Hancock, Cuixia Dai, Xuping Zhang, Ron D. Frostig, and Zhongping Chen

Biomed. Opt. Express 7(2), 601-615 (2016)  View: HTML | PDF

Tissue thickness calculation in ocular optical coherence tomography

David Alonso-Caneiro, Scott A. Read, Stephen J. Vincent, Michael J. Collins, and Maciej Wojtkowski

Biomed. Opt. Express 7(2), 629-645 (2016)  View: HTML | PDF

Multimodal 3D cancer-mimicking optical phantom

Gennifer T. Smith, Kristen L. Lurie, Dimitar V. Zlatev, Joseph C. Liao, and Audrey K. Ellerbee Bowden

Biomed. Opt. Express 7(2), 648-662 (2016)  View: HTML | PDF  [Suppl. Mat. (1)]

In vivo imaging of retinal hemodynamics with OCT angiography and Doppler OCT

Shenghai Huang, Meixiao Shen, Dexi Zhu, Qi Chen, Ce Shi, Zhongping Chen, and Fan Lu

Biomed. Opt. Express 7(2), 663-676 (2016)  View: HTML | PDF

Quantitative optical coherence elastography based on fiber-optic probe for in situ measurement of tissue mechanical properties

Yi Qiu, Yahui Wang, Yiqing Xu, Namas Chandra, James Haorah, Basil Hubbi, Bryan J. Pfister, and Xuan Liu

Biomed. Opt. Express 7(2), 688-700 (2016)  View: HTML | PDF  [Suppl. Mat. (3)]

Effect of a thin superficial layer on the estimate of hemodynamic changes in a two-layer medium by time domain NIRS

Rebecca Re, Davide Contini, Lucia Zucchelli, Alessandro Torricelli, and Lorenzo Spinelli

Biomed. Opt. Express 7(2), 264-278 (2016)  View: HTML | PDF

Toward in vivo biopsy of melanoma based on photoacoustic and ultrasound dual imaging with an integrated detector

Yating Wang, Dong Xu, Sihua Yang, and Da Xing

Biomed. Opt. Express 7(2), 279-286 (2016)  View: HTML | PDF

High frame rate photoacoustic imaging at 7000 frames per second using clinical ultrasound system

Kathyayini Sivasubramanian and Manojit Pramanik

Biomed. Opt. Express 7(2), 312-323 (2016)  View: HTML | PDF  [Suppl. Mat. (8)]

In vivo deconvolution acoustic-resolution photoacoustic microscopy in three dimensions

De Cai, Zhongfei Li, and Sung-Liang Chen

Biomed. Opt. Express 7(2), 369-380 (2016)  View: HTML | PDF  [Suppl. Mat. (2)]

Discrimination of healthy and osteoarthritic articular cartilage by Fourier transform infrared imaging and Fisher’s discriminant analysis

Zhi-Hua Mao, Jian-Hua Yin, Xue-Xi Zhang, Xiao Wang, and Yang Xia

Biomed. Opt. Express 7(2), 448-453 (2016)  View: HTML | PDF

Toward reliable retrieval of functional information of papillary dermis using spatially resolved diffuse reflectance spectroscopy

Yu-Wen Chen, Jun-Yen Guo, Shih-Yu Tzeng, Ting-Chun Chou, Ming-Jen Lin, Lynn Ling-Huei Huang, Chao-Chun Yang, Chao-Kai Hsu, and Sheng-Hao Tseng

Biomed. Opt. Express 7(2), 542-558 (2016)  View: HTML | PDF

Early detection and differentiation of venous and arterial occlusion in skin flaps using visible diffuse reflectance spectroscopy and autofluorescence spectroscopy

Caigang Zhu, Shuo Chen, Christopher Hoe-Kong Chui, Bien-Keem Tan, and Quan Liu

Biomed. Opt. Express 7(2), 570-580 (2016)  View: HTML | PDF

Portable handheld diffuse reflectance spectroscopy system for clinical evaluation of skin: a pilot study in psoriasis patients

Shih-Yu Tzeng, Jean-Yan Guo, Chao-Chun Yang, Chao-Kai Hsu, Hung Ji Huang, Shih-Jie Chou, Chi-Hung Hwang, and Sheng-Hao Tseng

Biomed. Opt. Express 7(2), 616-628 (2016)  View: HTML | PDF

Hollow optical-fiber based infrared spectroscopy for measurement of blood glucose level by using multi-reflection prism

Saiko Kino, Suguru Omori, Takashi Katagiri, and Yuji Matsuura

Biomed. Opt. Express 7(2), 701-708 (2016)  View: HTML | PDF

Low-dose, phase-contrast mammography with high signal-to-noise ratio

Lukas B. Gromann, Dirk Bequé, Kai Scherer, Konstantin Willer, Lorenz Birnbacher, Marian Willner, Julia Herzen, Susanne Grandl, Karin Hellerhoff, Jonathan I. Sperl, Franz Pfeiffer, and Cristina Cozzini

Biomed. Opt. Express 7(2), 381-391 (2016)  View: HTML | PDF

0.5 gigapixel microscopy using a flatbed scanner: erratum

Xiaoze Ou, Guoan Zheng, and Changhuei Yang

Biomed. Opt. Express 7(2), 646-647 (2016)  View: HTML | PDF