Introduction to the feature issue on the 25 year anniversary of optical coherence tomography

Joseph A. Izatt, Stephen Boppart, Brett Bouma, Johannes de Boer, Wolfgang Drexler, Xingde Li, and Yoshiaki Yasuno

Biomed. Opt. Express 8(7), 3289-3291 (2017)  View: HTML | PDF

En face coherence microscopy [Invited]

Olivier Thouvenin, Kate Grieve, Peng Xiao, Clement Apelian, and A. Claude Boccara

Biomed. Opt. Express 8(2), 622-639 (2017)  View: HTML | PDF

High-speed OCT light sources and systems [Invited]

Thomas Klein and Robert Huber

Biomed. Opt. Express 8(2), 828-859 (2017)  View: HTML | PDF

Optical coherence tomography based angiography [Invited]

Chieh-Li Chen and Ruikang K. Wang

Biomed. Opt. Express 8(2), 1056-1082 (2017)  View: HTML | PDF

Optical coherence elastography – OCT at work in tissue biomechanics [Invited]

Kirill V. Larin and David D. Sampson

Biomed. Opt. Express 8(2), 1172-1202 (2017)  View: HTML | PDF

Computational optical coherence tomography [Invited]

Yuan-Zhi Liu, Fredrick A. South, Yang Xu, P. Scott Carney, and Stephen A. Boppart

Biomed. Opt. Express 8(3), 1549-1574 (2017)  View: HTML | PDF

Review of intraoperative optical coherence tomography: technology and applications [Invited]

Oscar M. Carrasco-Zevallos, Christian Viehland, Brenton Keller, Mark Draelos, Anthony N. Kuo, Cynthia A. Toth, and Joseph A. Izatt

Biomed. Opt. Express 8(3), 1607-1637 (2017)  View: HTML | PDF

Polarization sensitive optical coherence tomography – a review [Invited]

Johannes F. de Boer, Christoph K. Hitzenberger, and Yoshiaki Yasuno

Biomed. Opt. Express 8(3), 1838-1873 (2017)  View: HTML | PDF

Endoscopic optical coherence tomography: technologies and clinical applications [Invited]

Michalina J. Gora, Melissa J. Suter, Guillermo J. Tearney, and Xingde Li

Biomed. Opt. Express 8(5), 2405-2444 (2017)  View: HTML | PDF

Review of adaptive optics OCT (AO-OCT): principles and applications for retinal imaging [Invited]

Michael Pircher and Robert J Zawadzki

Biomed. Opt. Express 8(5), 2536-2562 (2017)  View: HTML | PDF

Intravascular optical coherence tomography [Invited]

Brett E. Bouma, Martin Villiger, Kenichiro Otsuka, and Wang-Yuhl Oh

Biomed. Opt. Express 8(5), 2660-2686 (2017)  View: HTML | PDF

Twenty-five years of optical coherence tomography: the paradigm shift in sensitivity and speed provided by Fourier domain OCT [Invited]

Johannes F. de Boer, Rainer Leitgeb, and Maciej Wojtkowski

Biomed. Opt. Express 8(7), 3248-3280 (2017)  View: HTML | PDF  [Suppl. Mat. (2)]

OCT intensity and phase fluctuations correlated with activity-dependent neuronal calcium dynamics in the Drosophila CNS [Invited]

Minh Q. Tong, Md. Monirul Hasan, Sang Soo Lee, Md. Rezuanul Haque, Do-Hyoung Kim, Md. Shahidul Islam, Michael E. Adams, and B. Hyle Park

Biomed. Opt. Express 8(2), 726-735 (2017)  View: HTML | PDF  [Suppl. Mat. (1)]

Heart structural remodeling in a mouse model of Duchenne cardiomyopathy revealed using optical polarization tractography [Invited]

Y. Wang, K. Zhang, D. Duan, and G. Yao

Biomed. Opt. Express 8(3), 1271-1276 (2017)  View: HTML | PDF  [Suppl. Mat. (8)]

Retinal oximetry in humans using visible-light optical coherence tomography [Invited]

Siyu Chen, Xiao Shu, Peter L. Nesper, Wenzhong Liu, Amani A. Fawzi, and Hao F. Zhang

Biomed. Opt. Express 8(3), 1415-1429 (2017)  View: HTML | PDF

Reduction of frame rate in full-field swept-source optical coherence tomography by numerical motion correction [Invited]

Clara Pfäffle, Hendrik Spahr, Dierck Hillmann, Helge Sudkamp, Gesa Franke, Peter Koch, and Gereon Hüttmann

Biomed. Opt. Express 8(3), 1499-1511 (2017)  View: HTML | PDF

Reflectance-based projection-resolved optical coherence tomography angiography [Invited]

Jie Wang, Miao Zhang, Thomas S. Hwang, Steven T. Bailey, David Huang, David J. Wilson, and Yali Jia

Biomed. Opt. Express 8(3), 1536-1548 (2017)  View: HTML | PDF

Correlation of the derivative as a robust estimator of scatterer size in optical coherence tomography (OCT) [Invited]

M. Kassinopoulos, E. Bousi, I. Zouvani, and C. Pitris

Biomed. Opt. Express 8(3), 1598-1606 (2017)  View: HTML | PDF

Adaptive optics optical coherence tomography angiography for morphometric analysis of choriocapillaris [Invited]

Kazuhiro Kurokawa, Zhuolin Liu, and Donald T. Miller

Biomed. Opt. Express 8(3), 1803-1822 (2017)  View: HTML | PDF  [Suppl. Mat. (2)]

Embryonic aortic arch hemodynamics are a functional biomarker for ethanol-induced congenital heart defects [Invited]

Lindsy M. Peterson, Shi Gu, Ganga Karunamuni, Michael W. Jenkins, Michiko Watanabe, and Andrew M. Rollins

Biomed. Opt. Express 8(3), 1823-1837 (2017)  View: HTML | PDF

Wavefront sensorless adaptive optics OCT with the DONE algorithm for in vivo human retinal imaging [Invited]

Hans R. G. W. Verstraete, Morgan Heisler, Myeong Jin Ju, Daniel Wahl, Laurens Bliek, Jeroen Kalkman, Stefano Bonora, Yifan Jian, Michel Verhaegen, and Marinko V. Sarunic

Biomed. Opt. Express 8(4), 2261-2275 (2017)  View: HTML | PDF  [Suppl. Mat. (3)]

Classification and analysis of human ovarian tissue using full field optical coherence tomography

Sreyankar Nandy, Melinda Sanders, and Quing Zhu

Biomed. Opt. Express 7(12), 5182-5187 (2016)  View: HTML | PDF

Active-passive path-length encoded (APPLE) Doppler OCT

Andreas Wartak, Richard Haindl, Wolfgang Trasischker, Bernhard Baumann, Michael Pircher, and Christoph K. Hitzenberger

Biomed. Opt. Express 7(12), 5233-5251 (2016)  View: HTML | PDF

Choriocapillaris evaluation in choroideremia using optical coherence tomography angiography

Simon S. Gao, Rachel C. Patel, Nieraj Jain, Miao Zhang, Richard G. Weleber, David Huang, Mark E. Pennesi, and Yali Jia

Biomed. Opt. Express 8(1), 48-56 (2017)  View: HTML | PDF

Simultaneous multimodal ophthalmic imaging using swept-source spectrally encoded scanning laser ophthalmoscopy and optical coherence tomography

Joseph D. Malone, Mohamed T. El-Haddad, Ivan Bozic, Logan A. Tye, Lucas Majeau, Nicolas Godbout, Andrew M. Rollins, Caroline Boudoux, Karen M. Joos, Shriji N. Patel, and Yuankai K. Tao

Biomed. Opt. Express 8(1), 193-206 (2017)  View: HTML | PDF  [Suppl. Mat. (2)]

Structural and functional human retinal imaging with a fiber-based visible light OCT ophthalmoscope

Shau Poh Chong, Marcel Bernucci, Harsha Radhakrishnan, and Vivek J. Srinivasan

Biomed. Opt. Express 8(1), 323-337 (2017)  View: HTML | PDF

Low-cost hand-held probe for depth-resolved low-coherence interferometry

Paritosh Pande, Ryan L. Shelton, Guillermo L. Monroy, Ryan M. Nolan, and Stephen A. Boppart

Biomed. Opt. Express 8(1), 338-348 (2017)  View: HTML | PDF

Wide field and highly sensitive angiography based on optical coherence tomography with akinetic swept source

Jingjiang Xu, Shaozhen Song, Wei Wei, and Ruikang K. Wang

Biomed. Opt. Express 8(1), 420-435 (2017)  View: HTML | PDF

Golden angle based scanning for robust corneal topography with OCT

Joerg Wagner, David Goldblum, and Philippe C. Cattin

Biomed. Opt. Express 8(2), 475-483 (2017)  View: HTML | PDF

Multifrequency-swept optical coherence microscopy for highspeed full-field tomographic vibrometry in biological tissues

Samuel Choi, Keita Sato, Takeru Ota, Fumiaki Nin, Shogo Muramatsu, and Hiroshi Hibino

Biomed. Opt. Express 8(2), 608-621 (2017)  View: HTML | PDF

Noise stochastic corrected maximum a posteriori estimator for birefringence imaging using polarization-sensitive optical coherence tomography

Deepa Kasaragod, Shuichi Makita, Young-Joo Hong, and Yoshiaki Yasuno

Biomed. Opt. Express 8(2), 653-669 (2017)  View: HTML | PDF

Hematocrit dependence of flow signal in optical coherence tomography angiography

Jianlong Yang, Johnny Su, Jie Wang, Silu Men, Yali Jia, David Huang, and Gangjun Liu

Biomed. Opt. Express 8(2), 776-789 (2017)  View: HTML | PDF

Sub-micrometer axial resolution OCT for in-vivo imaging of the cellular structure of healthy and keratoconic human corneas

Kostadinka Bizheva, Bingyao Tan, Benjamin MacLelan, Olivera Kralj, Mojtaba Hajialamdari, Denise Hileeto, and Luigina Sorbara

Biomed. Opt. Express 8(2), 800-812 (2017)  View: HTML | PDF

Gabor fusion master slave optical coherence tomography

Ramona Cernat, Adrian Bradu, Niels Møller Israelsen, Ole Bang, Sylvain Rivet, Pearse A. Keane, David-Garway Heath, Ranjan Rajendram, and Adrian Podoleanu

Biomed. Opt. Express 8(2), 813-827 (2017)  View: HTML | PDF  [Suppl. Mat. (1)]

Methods to assess sensitivity of optical coherence tomography systems

Anant Agrawal, T. Joshua Pfefer, Peter D. Woolliams, Peter H. Tomlins, and George Nehmetallah

Biomed. Opt. Express 8(2), 902-917 (2017)  View: HTML | PDF

OCT-based full crystalline lens shape change during accommodation in vivo

Eduardo Martinez-Enriquez, Pablo Pérez-Merino, Miriam Velasco-Ocana, and Susana Marcos

Biomed. Opt. Express 8(2), 918-933 (2017)  View: HTML | PDF

Ultra-fast line-field low coherence holographic elastography using spatial phase shifting

Chih-Hao Liu, Alexander Schill, Raksha Raghunathan, Chen Wu, Manmohan Singh, Zhaolong Han, Achuth Nair, and Kirill V. Larin

Biomed. Opt. Express 8(2), 993-1004 (2017)  View: HTML | PDF

Fully integrated optical coherence tomography, ultrasound, and indocyanine green-based fluorescence tri-modality system for intravascular imaging

Yan Li, Joseph Jing, Yueqiao Qu, Yusi Miao, Buyun Zhang, Teng Ma, Mingyue Yu, Qifa Zhou, and Zhongping Chen

Biomed. Opt. Express 8(2), 1036-1044 (2017)  View: HTML | PDF

Coherence properties of short cavity swept lasers

Bart Johnson, Walid Atia, Mark Kuznetsov, Brian D. Goldberg, Peter Whitney, and Dale C. Flanders

Biomed. Opt. Express 8(2), 1045-1055 (2017)  View: HTML | PDF

Automated detection of dilated capillaries on optical coherence tomography angiography

Changlei Dongye, Miao Zhang, Thomas S. Hwang, Jie Wang, Simon S. Gao, Liang Liu, David Huang, David J. Wilson, and Yali Jia

Biomed. Opt. Express 8(2), 1101-1109 (2017)  View: HTML | PDF

VCSEL-based swept source for low-cost optical coherence tomography

Sucbei Moon and Eun Seo Choi

Biomed. Opt. Express 8(2), 1110-1121 (2017)  View: HTML | PDF

Measurement of dynamic cell-induced 3D displacement fields in vitro for traction force optical coherence microscopy

Jeffrey A. Mulligan, François Bordeleau, Cynthia A. Reinhart-King, and Steven G. Adie

Biomed. Opt. Express 8(2), 1152-1171 (2017)  View: HTML | PDF  [Suppl. Mat. (2)]

Deep feature learning for automatic tissue classification of coronary artery using optical coherence tomography

Atefeh Abdolmanafi, Luc Duong, Nagib Dahdah, and Farida Cheriet

Biomed. Opt. Express 8(2), 1203-1220 (2017)  View: HTML | PDF

Ultrahigh-resolution OCT imaging of the human cornea

René M. Werkmeister, Sabina Sapeta, Doreen Schmidl, Gerhard Garhöfer, Gerald Schmidinger, Valentin Aranha dos Santos, Gerold C. Aschinger, Isabella Baumgartner, Niklas Pircher, Florian Schwarzhans, Anca Pantalon, Harminder Dua, and Leopold Schmetterer

Biomed. Opt. Express 8(2), 1221-1239 (2017)  View: HTML | PDF

Lateral resolution improvement of oversampled OCT images using Capon estimation of weighted subvolume contribution

Evgenia Bousi, Ioanna Zouvani, and Costas Pitris

Biomed. Opt. Express 8(3), 1319-1331 (2017)  View: HTML | PDF

Quantitative characteristics of sickle cell retinopathy in optical coherence tomography angiography

Minhaj Alam, Damber Thapa, Jennifer I. Lim, Dingcai Cao, and Xincheng Yao

Biomed. Opt. Express 8(3), 1741-1753 (2017)  View: HTML | PDF

Joint retinal layer and fluid segmentation in OCT scans of eyes with severe macular edema using unsupervised representation and auto-context

Alessio Montuoro, Sebastian M. Waldstein, Bianca S. Gerendas, Ursula Schmidt-Erfurth, and Hrvoje Bogunović

Biomed. Opt. Express 8(3), 1874-1888 (2017)  View: HTML | PDF

Three-dimensional OCT based guinea pig eye model: relating morphology and optics

Pablo Pérez-Merino, Miriam Velasco-Ocana, Eduardo Martinez-Enriquez, Luis Revuelta, Sally A McFadden, and Susana Marcos

Biomed. Opt. Express 8(4), 2173-2184 (2017)  View: HTML | PDF  [Suppl. Mat. (1)]

Using speckle to measure tissue dispersion in optical coherence tomography

Christos Photiou, Evgenia Bousi, Ioanna Zouvani, and Costas Pitris

Biomed. Opt. Express 8(5), 2528-2535 (2017)  View: HTML | PDF