Abstract
Lineshape analysis is a recurrent and often computationally intensive task in optics, even more so for multiple peaks in the presence of noise. We demonstrate an algorithm which takes advantage of peak multiplicity (N) to retrieve line shape information. The method is exemplified via analysis of Lorentzian and Gaussian contributions to individual lineshapes for a practical spectroscopic measurement, and benefits from a linear increase in sensitivity with the number N. The robustness of the method and its benefits in terms of noise reduction and order of magnitude improvement in run-time performance are discussed.
© 2020 Optical Society of America under the terms of the OSA Open Access Publishing Agreement
1. Introduction
Analysis of signal lineshapes is a prominent problem and a theme of importance in physics, chemistry and biomedicine. Ranging from spectroscopy [1–3] to scattering techniques [4–7], the lineshape can reveal underlying physical processes. For example, relaxation dynamics very commonly give rise to exponential decays in time which correspond in spectroscopy to Lorentzian peaks in frequency, while static disorder and instrumental effects typically induce Gaussian distributions of characteristic frequencies. Together, the two phenomena yield signal lineshapes which are convolutions of Lorentzians with Gaussians, objects referred to as Voigt lineshapes. The accurate parametrization of a Voigt lineshape retrieves the Lorentzian contribution, which, e.g., quantifies correlation lengths in X-ray and neutron scattering [7] and coherence times of quantum systems in frequency-dependent spectroscopy [8–10]. The Gaussian part which is due to extrinsic factors such as grain size distribution in x-ray diffraction [6,11] and to spatial inhomogeneity in optical spectroscopy [2,12].
Approaches to lineshape determination (see [13] for an overview) deal with efficient numeric approximations [14,15] or tackle the deconvolution of single peaks in Fourier space [13,16,17], avoiding direct and computationally intensive Voigt profile fitting while allowing for correction of spurious frequencies. However, none of these numeric methods were applied in the context of multiplets, in spite of the numerous cases of finite-periodic signals, e.g., for electronic multiplets of ions in solids [18], rotational spectra of molecules [19–21], neutron-scattering-resolved hyperfine interaction [22], X-ray diffraction of superlattices [23], and frequency combs [24,25]. Directly fitting a sum of profiles apparently exacerbates the problems of a direct single profile fit and would sacrifice the benefits (e.g., computational speed-up) of Fourier space analysis. For well-separated profiles a split-up into single profiles may be a viable option, but misses an important feature of a combined analysis as we will show below.
In this article we extend previous work on single Voigt profile analysis [13,16,17] to multiplets and exploit the regular spacing for a robust and direct determination of the individual lineshape in Fourier space. Our method has multiple benefits. First, we exploit the speed of Fourier analysis while second, keeping the frequency-selective noise mitigation advantage from single-profile Fourier analysis. Third, the problem of multiplets becomes a benefit as we fit an exponential to the envelope of the Fourier transform of the signal, which is parametrized only by the Lorentzian and Gaussian contributions to the individual line width. The method quantifies these contributions without the need for involved multi-Voigt profile analysis. Results are also readily checked by direct visual inspection of the Fourier transform. Furthermore, our method is computationally less expensive and its sensitivity increases linearly in $N$, the number of profiles. Although we focus on the common case of Voigt-shaped profiles, we expect our method will prove advantageous for other line-profiles, such as listed in reference [26].
We first derive the mathematical foundations of the method in section 2. In section 3 we apply the procedure to typical experimental data from solid-state spectroscopy, in this case a rare-earth doped crystal. Finally, in section 4 we discuss the method’s performance when the initial assumption of finite-periodicity is relaxed.
2. Derivation of the method
We consider a real, finite-periodic signal $S({{x}})=\sum _iS_i(x)$, consisting of $N$ profiles $S_i(x)$ spaced by $\Delta {{x}}$. We focus on the common cases of individual signal profiles $S_i(x)$ of Lorentzian, Gaussian and Voigt shapes. The general case for other classes of lineshapes is addressed subsequently.
2.1 Dirac delta model
For simplicity we first model $S({{x}})$ as a series of $N$ Dirac delta functions $\delta ({{x}})$, with $N$ even, symmetrically distributed around ${{x}}=0$. Definitions and a detailed derivation are in section A and B of the Appendix. The Fourier transform $\mathcal {F}:{{x}}\rightarrow k$ applied to the Dirac model $S_{\mathrm {D}}({{x}})$ is given by
For simplicity, we consider the modulus of $\mathcal {F}_{\mathrm {D}}$ in this derivation to avoid the need for two exponential fits for positive and negative $\mathcal {M}_i$, as discussed in the following section and to allow for an application to more general cases as discussed in appendices E and F.
2.2 Lorentzian and Gaussian lineshapes
We now proceed to Lorentzian-shaped signal lines $S_i(x)=L({{x}})$, as illustrated in Fig. 2(a) and 2(b) for $N=8$. The shape is given by
2.3 Voigt profile model
The Voigt lineshape $V({{x}})$ is defined as the convolution $(*)$ of a Lorentzian with a Gaussian function
and equivalently We find for $\mathcal {F}_{\mathrm {V}}=\mathcal {F}[S_{\mathrm {V}}({{x}})]$ (c.f. Appendix D)Given a finite-periodic signal $S({{x}})$ consisting of $N$ Voigt-profile peaks $S_i(x)$, spaced by $\Delta {{x}}$, the line width contributions $\Gamma ,\sigma$ of the individual signal peaks $S_i(x)$ can thus be determined by fitting $E_{\mathrm {V}}(k)$ to the $\mathcal {M}_{i}$, allowing to distinguish the Lorentzian contribution to the line width from that due to the Gaussian. From Eq. (9) and Fig. 3 the behavior of $\mathcal {F}_{\mathrm {V}}$ is dominated by $E_{\mathrm {L}}(k)$ for small $k$ and by $E_{\mathrm {G}}(k)$ for large $k$, which allows for a quick qualitative analysis of the Lorentzian contribution by examination of the first few $\mathcal {M}_{i}$ - even by eye. In principle this applies also to the strong suppression or the slow decay of the tail by $E_{\mathrm {G}}(k)$ and $E_{\mathrm {L}}(k)$ respectively, but might not be unambiguously determined due to noise.
2.4 Sensitivity and generalization of the method
The Fourier transform simplifies the convolution integral to a product and thus, the number of profiles can be understood as the number of terms of a discrete Fourier transform leading to a linear increase of the sensitivity, proportional to $N$ (see Eq. (20) in the Appendix). This is analogous to the $N-$periodic diffraction grating; the $\mathcal {M}_{i}$ become more expressed and sharpen as $N$ increases with the limit of becoming the Dirac comb for $N\rightarrow \infty$. This allows us to extract values for $\mathcal {M}_{i}$ even if $\mathcal {L}_{j}$ is below the noise level in the experimental setup. Thus, our result is particularly interesting for experimental applications where $N$ is large (e.g., [21], $N>60$) and the $\mathcal {M}_{i}$ best expressed. The case for small $N$ or even $N=1$ (c.f. Ref. [13,17]) is possible, but exhibits eventually vanishing advantage from the sensitivity scaling with $N$. We note that the FLA method exhibits a particular strength for applications to measurement resolution-limited spectra. With constant resolution and increasing $N$, the resolution of $\mathcal {F}_{\mathrm {D}}$ in $k-$space and thus the precision of the $\mathcal {M}_{i}$ is increased. However, increasing the resolution of a single-peak measurement does not increase the number of $\mathcal {M}_{i}$ usable for the envelope fit, but extends $\mathcal {F}_{\mathrm {D}}$ further in $k-$space (c.f. Fig. 4(b)).
Thanks to the simplification of the convolution integral and the scaling of the sensitivity with $N$, our method should be as beneficial when applied to other classes of convolved line profiles [26] as for the Voigt profile. The accuracy for each case would, however, need to be separately analyzed.
3. Example
In this section we demonstrate the application of the proposed method to a multiplet signal, which in this case is a typical absorbance spectrum measured in transmission for a LiY$_{1-x}$Ho$_x$F$_4$ single crystal with $x=0.3\%$ at a temperature $T$ of $3.8$ K with a Fourier transform infrared (FTIR) spectrometer. The Bruker IFS125 spectrometer is based at the infrared beamline of the Swiss Light Source at Paul Scherrer Institut in Villigen, Switzerland [29]. The spectrum in Fig. 4(a) shows the hyperfine-split ground state to second excited state transition at $\sim 23.3$ cm$^{-1}$ (700 GHz) in spectroscopic units [cm$^{-1}$]. Thanks to the ultra-high resolution FTIR in combination with the highly collimated, high-brillance infrared beam we achieved 0.001 cm$^{-1}$ (30 MHz) resolution, corresponding to 4779 measurement points in total and $\sim 16$ points per individual peak width. We refer to Matmon et al. [18] for details on the general experimental setup and FTIR technique as well as for more extensive, spectroscopic work on LiY$_{1-x}$Ho$_x$F$_4$. The FLA method is ideal for analysis of multiple spectra as a function, e.g., of temperature as in the latter case, thanks to its efficiency.
3.1 Procedure
Equation (9) leads to an algorithmic procedure for extracting the shape and line width of a finite-periodic signal:
- 1. Calculate the Fourier transform of the finite-periodic signal and take the modulus.
- 2. Determine the maxima $\mathcal {M}_{i}$ defining the envelope $E_{\mathrm {V}}(k)$, which occur with periodicity $T_s$.
3.2 Application to experimental data
We apply the above procedure to the transmission spectrum in Fig. 4(a). More details on the numerical discrete Fourier transform (DFT) procedure are found in the Appendix G. Figure 4(b) shows the modulus of the DFT coefficients $c_k$ of the unapodized (blue) and apodized (red) spectrum (details of apodization are in Appendix G) in Fig. 4(a) for $k<600$. The characteristic pattern of Eq. (9) is evident in Fig. 4. The inset displays all Fourier coefficients. We observe reduced noise frequencies in $k$-space in Fig. 4(b) for the apodized spectrum and a different global scaling factor $P$ with respect to the unapodized spectrum. However, the decay constants $\Gamma ,\sigma$ are unchanged.
Figure 5 shows the DFT of the apodized spectrum and the $\mathcal {M}_{i}$. We apply a simple algorithm detecting the evenly-spaced maxima $\mathcal {M}_{i}$ with period $T_s\sim 45$ Fourier coefficients. We set a conservative threshold at $k=520$ to ensure a fiducial selection of the $\mathcal {M}_{i}$. We drop $\mathcal {M}_{0}$ as it is strongly affected by the Fourier transforms zero center peak. The result of the envelope $E(\Gamma ,\sigma ,P)$ fit for a Lorentzian, Gaussian and Voigt lineshape to the $\mathcal {M}_{i}$ is displayed in Fig. 5. We observe that the Voigt profile yields the largest $R^{2}=0.998$ value and at least two times smaller residuals in comparison to the pure Gaussian or Lorentzian profile. The fit results are $\Gamma =1.1\times 10^{-2}\pm 0.12\times 10^{-3}$ cm$^{-1}$ and $\sigma =3.5\times 10^{-3}\pm 0.6\times 10^{-3}$ cm$^{-1}$ with uncertainties being standard parameter estimation errors obtained by covariance matrix. With Eq. (6) we find $f_{\mathrm {G}}=8.5\times 10^{-3}\pm 1.4\times 10^{-3}$ cm$^{-1}$ and with Eq. (11) $f_{\mathrm {V}}=15.7\times 10^{-3}\pm 1.6\times 10^{-3}$ cm$^{-1}$. The same values within the fit precision are obtain by a direct Voigt profile fit to the individual signal peaks. The method determines that $f_{\mathrm {L}}$, the Lorentzian part of the line width, is the slightly larger contribution.
4. Robustness, noise stability and run time
We discuss the robustness of the method under deviations to the initial assumption of regular spacing and compare its performance to a direct least-squares fit method (DFM).
4.1 Robustness
In the case of unequal areas $A_i$, the individual areas $A_i$ of the signal lines appear as an overall scaling factor (derivation in Appendix E) which is already considered in section 3. This allows the application of the method in cases where the individual signal line varies strongly in intensity e.g. for rotational/vibrational spectra [21]. The extracted line width in case of differing individual line widths $\Gamma _i,\sigma _i$ is a weighted average (c.f. Appendix F).
As regular spacing is the underlying assumption, a variation of the line spacing $\Delta {{x}}$ directly modifies the $\mathcal {M}_{i}$ and thus the observed envelope $E(\Gamma ,\sigma ,P)$. Because of the line spacing variation the $N$ frequencies exhibit phase differences resulting in destructive interference and less expressed $\mathcal {M}_{i}$ (c.f. Appendix B). This leads to an overestimation of the width and deviation from actual profile shape. We note that a second order hyperfine interaction in the example spectrum (for details see [18]) results in a 2.7 % deviation from equidistancy of the eight hyperfine lines. Nevertheless we obtain equivalent results for line width and shape, showing the robustness of the method against small (on the scale of $\lesssim \Delta {{x}}/N$) relaxation in finite-periodicity of $\lesssim 3\%$. Furthermore, if the variations $\Delta {{x}}_i$ are known, then $E(\Gamma ,\sigma ,P)$ could be adjusted to depend on the $\Delta {{x}}_i$.
4.2 Noise-stability
The noise spectrum is explicitly revealed with the FLA method. In case of a few isolated frequencies, as in e.g. the inset in Fig. 4, the noise does not affect the envelope fit in $k$-space and the method naturally implements a low-pass frequency filter. A particular strength of the method comes from the possibility to fade out noisy peaks that occur at frequencies between the $\mathcal {M}_{i}$ as is the case in Fig. 4 at e.g. $k=70$. Such noise peaks will affect the DFM results and low-pass filters can not be applied. Consideration only of $\mathcal {M}_{i}$ for the envelope fit provides an inherent and impartial filter of the associated noise.
Assuming Gaussian RMS noise for artificial spectra with up to 50% of the signal amplitude, we find the FLA method to be comparable to DFM within the statistical parameter errors (c.f. Appendix H). This holds true for different ratios of $\Gamma /\sigma \in {0.1,1,10}$. We find that the precision for both, FLA and DFM strongly decreases for $\Gamma /\sigma <0.1$ and $\Gamma /\sigma >10$. We observe a systematic error for the FLA method in the form of an increase of the Gaussian line width contribution with increasing RMS noise amplitude. We attribute this to the fact that our analysis in Fourier space reflects the noise spectrum convolved with the signal and thus adds to the Gaussian line width contribution. Although the DFM method may occasionally exhibit a more precise performance, the FLA method extracts line width and shape information algorithmically, with less computational power and fewer data points, as detailed in the next subsection.
4.3 Run time
We note the significantly different computational intensity of both methods. On our system (Intel Xeon E5-2670 0 @2.6 GHz, 2 processors with 192 GB usable RAM) DFM is at least one to two orders of magnitude slower than the FLA method. A test on 1000 data sets with $N=8$ peaks, 1000 data points, and varying Gaussian RMS noise yielded 1.6 s run time for the FLA method and 2543 s for DFM. Runtimes are dataset specific and further (algorithm) optimization may reduce the run time discrepancy. For fundamental reasons, however, a run time difference will persist as the FLA method allows to reduce the parameter space to four $(\Gamma ,\sigma ,P,c)$, whereas a direct fit method has to consider at least six ($\Gamma ,\sigma$,area $A$, position $x_0$, spacing $s$, offset $c$) under the assumption of identical areas $A_i$, which is rarely fulfilled. Any individual consideration of a parameter in the direct fit scales the parameter space with $N$. This increases the run time for the DFM method significantly. Furthermore, the final envelope fit is performed on a fraction of the initial data points. In case of insufficient precision of the FLA method, it may well serve as a fast pre-analysis for good DFM start parameters.
5. Conclusion
We have introduced and demonstrated a method of extracting the line-width and shape of a multiplet signal. The basic idea and mathematics are actually straightforward generalizations of the Debye-Waller effect [30] in scattering techniques, where the intensities of Bragg peaks shrink with increasing order in proportion to an envelope function decaying as a Gaussian whose width in reciprocal space is inversely proportional to the uncertainty in the positions of the atoms in real space. We offer a direct and computationally efficient way of quantifying the Lorentzian and Gaussian parts of multiple Voigt profiles by harnessing the regular spacing of the signal. The method benefits from a linear increase in sensitivity with the number of profiles of the multiplet. Furthermore, we highlighted that the FLA method is comparable to a direct least square fit, but is less computationally intensive and exhibits significant advantages in the presence of low-frequency noise. Finally, the FLA method might serve as a fast and algorithmic pre-analysis for starting parameter determination cases where the assumption of periodic repetition of the same lineshape is broken. Potential applications are ample. X-ray scattering may benefit where quasiperiodic structures are sampled within finite real space windows for problems such as integrated circuit microscopy [31,32]. Our method could also be applied to optical comb-based spectroscopies [24] for precision measurements in atomic and solid-state physics.
Appendix
A. Definitions
The Fourier transform we use throughout the article is defined as
The rectangular window function of height $h$ and width $w$ is defined as
where we use the standard definition for the unit rectangular function $\mathrm {rect}(x)=1~\forall x \in \{-1/2,1/2\}$ and 0 otherwise.The model where the individual signal peaks $S_i(x)=G({{x}})$ are Gaussian (c.f. Fig. 2(a) and (b) ) is given by
B. Detailed derivation
The Dirac model $S_{\mathrm {D}}({{x}})$ is given by
assuming symmetry around ${{x}}=0$. With $\{A,n,\Delta {{x}},k\}\in \mathbb {R}$ we obtain for $\mathcal {F}_{\mathrm {D}}$C. Alternative derivation
A sum of $N$ delta functions centered around 0 and spaced by $\Delta x$ can be written as
D. Detailed derivation of Voigt model
We present the detailed derivation for $\mathcal {F}_{\mathrm {V}}$.
E. Relaxation of identical area
We derive the general case for varying areas $A_n$ by using $|z|^{2}=z\times \bar {z}$
F. Relaxation of identical line width and shape
We start from Eq. (29) treating the general case of varying $\Gamma _n,\sigma _n$
G. Details on numerical Fourier transform and apodization
Prior to the Fourier transform, the application of an apodization function to the spectrum is recommended. High frequency noise and distortion effects of lineshapes due to the DFT on finite-sized signals are minimized. The red trace in Fig. 4(a) is apodized by a 4 $\textrm {cm}^{-1}$ wide Blackman-Harris 4-term (BH4T) apodization function [33,34], centered at 23.3 $\textrm {cm}^{-1}$. The unit width BH4T$(x)$ function $-1/2\le x\le 1/2$ is defined as
H. RMS noise test
For the RMS noise test we create artificial data, where we add different amplitudes of RMS noise and apply the FLA as well as the DFM method with a Voigt lineshape model, for the case of $N=8$ peaks. The results are shown in Fig. 6. Gridlines denote the initial values before RMS noise application. For contribution ratios $\Gamma /\sigma =0.1$ the FLA method tends to overestimate the overall line width. We attribute this to a systematic error, which pushes the ratio in the limit where the methods precision strongly decreases.
Funding
Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (200021_166271); European Research Council under the European Union’s Horizon 2020 research and innovation programme HERO (Grant agreement No. 810451).
Acknowledgments
FTIR spectroscopy data were collected at the X01DC beamline of the Swiss Light Source, Paul Scherrer Institut, Villigen, Switzerland. We are grateful to J.W. Spaak, G. Matmon and M. Grimm for helpful discussions and G. Matmon and S. Gerber for critically reviewing the manuscript.
Disclosures
The authors declare that they have no competing interests.
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