fNIRS Artifact Removal Using Selective Source Separation

Patashov Dmitry, Menahem Yakir, Kameda Yoshinari, Goldstein Dmitry, and Balberg Michal

BF1B.2 Optics and the Brain (BRAIN) 2021 View: PDF

Robust feature extraction techniques for separating cerebral signals from the systemic changes in adult humans

Zahida Guerouah and Vladislav Toronov

BF1B.3 Optics and the Brain (BRAIN) 2021 View: PDF

Accuracy of Diffuse Correlation Spectroscopy measurements of brain blood flow when using a three-layer analytical model

Hongting Zhao, Eashani Sathialingam, and Erin M. Buckley

BF1B.4 Optics and the Brain (BRAIN) 2021 View: PDF

Approaches to Improve Brain Specificity and Accuracy with Interferometric Diffusing Wave Spectroscopy

Mingjun Zhao, Wenjun Zhou, and Vivek J. Srinivasan

BF1B.5 Optics and the Brain (BRAIN) 2021 View: PDF

Dual-Slope Optical Measurements of Cerebral Blood Flow and Autoregulation During Hypercapnia

Thao Pham, Giles Blaney, Angelo Sassaroli, Cristianne Fernandez, and Sergio Fantini

BF1B.6 Optics and the Brain (BRAIN) 2021 View: PDF

Birefringence Microscopy for Label-Free Imaging of Myelin Degeneration in Brain Sections

Nathan Blanke and Irving J. Bigio

BF2B.2 Optics and the Brain (BRAIN) 2021 View: PDF

Wide-Field Optical Imaging of Neurovascular Coupling during Stroke Recovery

Smrithi Sunil, Sefik Evren Erdener, Shashwat Shah, John Jiang, and David A. Boas

BF2B.3 Optics and the Brain (BRAIN) 2021 View: PDF

Using Digital Pathology to Identify and Quantify Cerebral Microhemorrhages

Christian Crouzet, Rachel H Chae, Gwangjin Jeong, Krystal T LoPresti, Cody E Dunn, Danny F Xie, Chiagoziem Agu, Chuo Fang, Ane CF Nunes, Wei Ling Lau, Sehwan Kim, David H Cribbs, Mark Fisher, and Bernard Choi

BF2B.4 Optics and the Brain (BRAIN) 2021 View: PDF

High-resolution structural and functional deep brain imaging using adaptive optics three-photon microscopy

Lina Streich, Juan Boffi, Ling Wang, Khaleel Alhalaseh, Matteo Barbieri, Ronja Rehm, Senthilkumar Deivasigamani, Cornelius Gross, Amit Agarwal, and Robert Prevedel

BM1B.3 Optics and the Brain (BRAIN) 2021 View: PDF

Analysis of human iPSC-derived neuronal networks (hiPSCNN) using holographic single cell and full field optogenetic stimulation

Felix Schmieder, Rouhollah Habibey, Volker Busskamp, Lars Büttner, and Jürgen W. Czarske

BM1B.4 Optics and the Brain (BRAIN) 2021 View: PDF

Multimodal Monitoring of Human Brain Organoids Implanted in Mice Using Transparent Microelectrodes

Martin Thunemann, Madison Wilson, Francesca Puppo, Donald P. Pizzo, Hannah Rickner, Emma Bortz, Abed AlFatah Mansour, Benjamin Wolozin, Xue Han, Fred H. Gage, Alysson R. Muotri, Duygu Kuzum, and Anna Devor

BM2B.4 Optics and the Brain (BRAIN) 2021 View: PDF

A Mesoscopic Oblique Plane Microscopy (OPM) Platform for Centimeter Scale Volumetric Imaging

Wenjun Shao, Kivilcim Kilic, Wenqing Yin, Gregory Wirak, Xiaodan qin, Hui Feng, David Boas, Christopher V. Gabel, and Ji Yi

BM3B.1 Optics and the Brain (BRAIN) 2021 View: PDF

Confocal Bessel Beam Light-sheet and Expansion Microscopy for Axonal Connectomics of Mammalian Brains

Kevin T. Takasaki, Ruixuan Gao, Emily Turschak, Pooja Balaram, Arthur Edgren, Sharmishtaa Seshamani, Michael J. Taormina, Philip R. Nicovich, and R. Clay Reid

BM3B.2 Optics and the Brain (BRAIN) 2021 View: PDF

Implantable integrated photonic probe for light sheet brain imaging in vivo

Nathan C. Lin, Xuan Zhao, Sakib Hassan, Ankit Raghuram, Ashok Veeraraghavan, and Jacob T. Robinson

BM3B.3 Optics and the Brain (BRAIN) 2021 View: PDF

Rapid imaging of deep-tissue motion with parallelized diffuse correlation spectroscopy

Shiqi Xu, Xi Yang, Pavan Chanda Konda, and Roarke Horstmeyer

BTh1B.3 Optics and the Brain (BRAIN) 2021 View: PDF

A Method for Improving the Dynamic Range of Integrated Diffuse Speckle Contrast Spectroscopy

Arindam Biswas, Arash Takshi, and Ashwin B. Parthasarathy

BTh1B.4 Optics and the Brain (BRAIN) 2021 View: PDF

Cerebral Blood Flow Monitoring via Superconductive Nanowire Single Photon Detection

Nisan Ozana, Dibbyan Mazumder, Alexander I. Zavriyev, Megan Blackwell, Stefan A. Carp, and Maria Angela Franceschini

BTh1B.5 Optics and the Brain (BRAIN) 2021 View: PDF

Quantitative Measurement of Static and Dynamic Tissue Optical Properties with Continuous Wave Pathlength Resolved Diffuse Correlation Spectroscopy

Abdul Mohaimen Safi, Sadhu Moka, Mitchell Harrah, Stephen Cini, and Ashwin B. Parthasarathy

BTh1B.6 Optics and the Brain (BRAIN) 2021 View: PDF

Miniaturized head-mounted device for whole cortex mesoscale imaging in freely behaving mice

Mathew L Rynes, Daniel Surinach, Samantha Linn, Michael Laroque, Vijay Rajendran, Judith Dominguez, Orestes Hadjistamolou, Zahra S Navabi, Leila Ghanbari, Gregory W Johnson, Mojtaba Nazari, Majid Mohajerani, and Suhasa B Kodandaramaiah

BTh2B.3 Optics and the Brain (BRAIN) 2021 View: PDF

Volumetric fluorescence imaging with a wearable Computational Miniature Mesoscope

Yujia Xue, Ian G. Davison, David A. Boas, and Lei Tian

BTh2B.4 Optics and the Brain (BRAIN) 2021 View: PDF

Bio-FlatScope: a flat, lensless microscope for fluorescence imaging

Jimin Wu, Dong Yan, Vivek Boominathan, Jesse K. Adams, Ashok Veeraraghavan, and Jacob T. Robinson

BTh2B.5 Optics and the Brain (BRAIN) 2021 View: PDF

An efficient brain mapping pipeline with enhanced multi-channel image registration

Xuechun Wang, Weilin Zeng, and Peng Fei

BTu1B.1 Optics and the Brain (BRAIN) 2021 View: PDF

Scatterometry on whole brain sections using Scattered Light Imaging

Miriam Menzel, Marouan Ritzkowski, David Grässel, Philipp Schlömer, Katrin Amunts, and Markus Axer

BTu1B.2 Optics and the Brain (BRAIN) 2021 View: PDF

Estimating the Spatial Behavior of Fiber Photometry Across Different Brain Regions

Cinzia Montinaro, Barbara Spagnolo, Marco Pisanello, Filippo Pisano, Antonio Balena, Marco Bianco, Virgilio Brunetti, Francesco De Nuccio, Dario Domenico Lofrumento, Tiziano Verri, Massimo De Vittorio, and Ferruccio Pisanello

BTu1B.3 Optics and the Brain (BRAIN) 2021 View: PDF

Fourier-Based Quantification of Cerebral Oxygen Pressure Using Phosphorescence Lifetime Microscopy

Chang Liu, Amanda Chisholm, Buyin Fu, Ikbal Sencan, Sava Sakadžić, and Mohammad Abbas Yaseen

BTu1B.4 Optics and the Brain (BRAIN) 2021 View: PDF

Targeted imaging system for voltage indicator readout

Isabell Whiteley, Chenchen Song, Thomas Knopfel, and Christopher J Rowlands

BTu3B.1 Optics and the Brain (BRAIN) 2021 View: PDF

Developing biolight-based molecular technologies for simultaneous mapping, imaging, and controlling neural activity

Emmanuel Luis Crespo, Akash Pal, Mansi Prakash, Manuel Gomez-Ramirez, Zohair Zaidi, Nicholas Coon, William Medendorp, Suneeti Dash, Tariq Brown, Nathan Shaner, Diane Lipscombe, Christopher I Moore, and Ute Hochgeschwender

BTu3B.2 Optics and the Brain (BRAIN) 2021 View: PDF

Label-free Map of Adult Danionella dracula Brain for in vivo Navigation Using Third Harmonic Generation Microscopy

Najva Akbari, Rose L. Tatarsky, Andrew H. Bass, and Chris Xu

BTu3B.3 Optics and the Brain (BRAIN) 2021 View: PDF

Near Field Optical Sensing of Single Cell Activity with Integrated Micro-Ring Resonators

Xuan Zhao, Bo Fan, Sakib Hassan, Ashok Veeraraghavan, and Jacob T. Robinson

BTu3B.4 Optics and the Brain (BRAIN) 2021 View: PDF

Using a laser scalpel to analyze dendritic spikes

Michael L. Castañares, Hans-A. Bachor, and Vincent R. Daria

BTu3B.5 Optics and the Brain (BRAIN) 2021 View: PDF

Quantitative Cerebral Blood Flow Imaging with Synthetic Single-Shot Multi-Exposure Laser Speckle Imaging

Abdul Mohaimen Safi, Cesar Hernandez-Isidro, Stephen Cini, Sadhu Moka, Mitchell Harrah, Christopher L. Passaglia, and Ashwin B. Parthasarathy

BW3B.4 Optics and the Brain (BRAIN) 2021 View: PDF

hNIR: a hyperspectral imaging system for mapping changes in haemoglobin and cytochrome-c-oxidase on the exposed cerebral cortex of mice

Luca Giannoni, Frédéric Lange, Marija Sajic, Kenneth J. Smith, and Ilias Tachtsidis

BW3B.5 Optics and the Brain (BRAIN) 2021 View: PDF

Analysis in the Broader, Medium, and Narrow Autism Phenotypes Using fNIRS

Michelle Rojas-Cisneros, Samuel Antonio Montero-Hernandez, and Felipe Orihuela-Espina

BW4B.4 Optics and the Brain (BRAIN) 2021 View: PDF

Correlation between socioeconomic disadvantage in preschool children and brain organization: a functional NIRS connectivity study

Allie Burgess, Samuel Montero Hernandez, Xinge Li, Johanna Bick, and Luca Pollonini

BW4B.5 Optics and the Brain (BRAIN) 2021 View: PDF

Investigation of neurovascular coupling in four vigilance states of the human brain by simultaneous EEG-fNIRS measurement and wavelet coherence analysis

Parisa Rabbani, Xinlong Wang, Olajide Babawale, Jae Gwan Kim, and Hanli Liu

BW4B.6 Optics and the Brain (BRAIN) 2021 View: PDF

X-Ray Phase Contrast Imaging of Coronary Arteries

Inayathullah Ghori, Vikas Thapa, and Renu John

JTu4A.13 Optics and the Brain (BRAIN) 2021 View: PDF

Effects of signal fluctuations in broadband near-infrared spectroscopy (bb-NIRS) on concentration quantification

Sadra Shahdadian, Nghi Cong Dung Truong, Xinlong Wang, and Hanli Liu

JTu4A.15 Optics and the Brain (BRAIN) 2021 View: PDF

Subtraction Imaging Based on Confocal Microscopy with Array Detection

Famin Wang, Jian Chang, Yunhai Zhang, Xin miao, and Hangfeng Li

JTu4A.20 Optics and the Brain (BRAIN) 2021 View: PDF

A Modified Watershed Algorithm for Automated Segmentation of Autofluorescence Microscopy Images

Nianchao Wang, Linghao Hu, Johanna Webb, and Alex J. Walsh

JTu4A.22 Optics and the Brain (BRAIN) 2021 View: PDF

How random measurement errors propagate to the chromophore concentration calculation in broadband near-infrared spectroscopy

Nghi Cong Dung Truong, Sadra Shahdadian, Xinlong Wang, and Hanli Liu

JTu4A.24 Optics and the Brain (BRAIN) 2021 View: PDF

Dependance of variance in estimation of hemoglobin concentration changes on system noise and two wavelengths chosen

Nghi Cong Dung Truong, Sadra Shahdadian, Xinlong Wang, and Hanli Liu

JTu4A.25 Optics and the Brain (BRAIN) 2021 View: PDF

Transcranial 1064-nm laser photobiomodulates human EEG brain networks at resting state identified by singular value decomposition and eLORETA

Xinlong Wang, Hashini Wanniarachchi, and Hanli Liu

JTu4A.26 Optics and the Brain (BRAIN) 2021 View: PDF

Transcranial Photobiomodulation (tPBM) Recipients Present Information Flow Alterations in the Cortex: an eCONNECTOME Brain Space ROI Analysis

Tyrell Pruitt, Xinlong Wang, Hashini Wanirachichi, and Hanli Liu

JTu4A.27 Optics and the Brain (BRAIN) 2021 View: PDF

Transcranial Photobiomodulation (tPBM) Enhances Local Hemodynamics and Global Dynamic Connectivity in the Cortex as Measured by fNIRS

Hashini Wanniarachchi, Xinlong Wang, Elizabeth L. Urquhart, and Hanli Liu

JTu4A.28 Optics and the Brain (BRAIN) 2021 View: PDF

Three-Dimensional Visualization and Quantitative Characterization of Cerebral Microvasculature in Mice

Danny Xie, Christian Crouzet, Katiana Khouri, Krystal LoPresti, Yuke Wang, Christopher Robinson, David Cribbs, Mark Fisher, and Bernard Choi

JTu4A.29 Optics and the Brain (BRAIN) 2021 View: PDF

Tapered Optical Fibers toward Depth Resolved Fluorescence Lifetime Photometry in brain tissue

Marco Bianco, Antonio Balena, Marco Pisanello, Filippo Pisano, Leonardo Sileo, Barbara Spagnolo, Cinzia Montinaro, Bernardo L. Sabatini, Massimo De Vittorio, and Ferruccio Pisanello

JTu4A.31 Optics and the Brain (BRAIN) 2021 View: PDF

Hemodynamic Response Function from Osteoarthritic Pain using functional Near-Infrared Spectroscopy

Natalia A. Vallenilla, Samuel Montero-Hernandez, Hyochol Ahn, Hongyu Miao, and Luca Pollonini

JTu4A.32 Optics and the Brain (BRAIN) 2021 View: PDF

Dual-channel Diffuse Correlation Spectroscopy for Simultaneous Blood Flow Measurement of Multiple Muscles

Tomohiro Tsuchiya, Yukihiko Yamamoto, Mikie Nakabayashi, Masashi Ichinose, and Yumie Ono

JTu4A.7 Optics and the Brain (BRAIN) 2021 View: PDF

Image Guided No Incision Laser Surgery Method and Apparatus by Multi-beam Interference

Joyce Liu

JTu4A.9 Optics and the Brain (BRAIN) 2021 View: PDF

Fully Organic, X-ray Radioluminescent Crystalline Colloidal Arrays for Next-Generation Bioimaging

Haley W. Jones, Yuriy Bandera, and Stephen H. Foulger

JW1A.11 Optics and the Brain (BRAIN) 2021 View: PDF

Organic X-Ray Radioluminescent Crystalline Colloidal Arrays Encapsulated in Poly(Ethylene Glycol) Methacrylate Based Hydrogel Films

Sarah Mell, Haley W. Jones, Yuriy Bandera, and Stephen H. Foulger

JW1A.12 Optics and the Brain (BRAIN) 2021 View: PDF

Reliability of automated optical determination of capillary refill time

Zbignevs Marcinkevics, Edgars Laksa, Oskars Rubenis, and Mara Blumfelde

JW1A.13 Optics and the Brain (BRAIN) 2021 View: PDF

Multispectral Photophletysmography for Evaluation of Cutaneous Flowmotions

Zbignevs Marcinkevics, Alise Aglinska, Uldis Rubins, and Andris Grabovskis

JW1A.14 Optics and the Brain (BRAIN) 2021 View: PDF

Human Cervix Imaging and Analysis with Optical Coherence Tomography

James P. McLean, Shuyang Fang, Kristin M. Myers, and Christine P. Hendon

JW1A.15 Optics and the Brain (BRAIN) 2021 View: PDF

Convolutional Neural Network-based Optical Coherence Tomography (OCT) A-scan Segmentation and Tracking Platform using Advanced Monte Carlo Simulation

Shoujing Guo and Jin U. Kang

JW1A.16 Optics and the Brain (BRAIN) 2021 View: PDF

Computationally efficient phase aberration compensation method for digital holographic microscopy of biological samples

Sofía Obando-Vásquez and Carlos Trujjillo

JW1A.19 Optics and the Brain (BRAIN) 2021 View: PDF

Label-free Quantification of Bilirubin Content using Absorption Spectrum

Swati Mishra and Harshawardhan Wanare

JW1A.2 Optics and the Brain (BRAIN) 2021 View: PDF

Transcranial photobiomodulation with light emitting diodes increases vigilance performance and EEG alpha power of the human brain

Akhil Chaudhari, Xinlong Wang, Anqi Wu, Jacek P. Dmochowski, and Hanli Liu

JW1A.20 Optics and the Brain (BRAIN) 2021 View: PDF

fNIRS correlates of attentional states in Brodmann Area 10

Mehmet Günal, Daniel Krawczyk, and Hanli Liu

JW1A.24 Optics and the Brain (BRAIN) 2021 View: PDF

BOLD fMRI in Mice with Large-Scale Optical Cranial Windows

Patrick Doran, Philipp Mächler, Ikbal Sencan, Martin Thunemann, Buyin Fu, Yuanyuan Jiang, Xin Yu, Joseph B. Mandeville, Sava Sakadzic, and Anna Devor

JW1A.25 Optics and the Brain (BRAIN) 2021 View: PDF

Europium-doped-nanoparticle-based multiplexed lateral flow immunoassay for the quantitative and highly sensitive detection of enterotoxins

F. Mousseau, C. Feraudet-Tarisse, S. Simon, T. Gacoin, C. Bouzigues, and A. Alexandrou

JW1A.4 Optics and the Brain (BRAIN) 2021 View: PDF

Development of a Method for Quantitative Fluorescence Analysis using a Correlation Detector

Jonathan Bier, Michael Keusgen, and Jochen Frey

JW1A.5 Optics and the Brain (BRAIN) 2021 View: PDF