Deformable mirror-based photoacoustic remote sensing (PARS) microscopy for depth scanning

Lyazzat Mukhangaliyeva, Samed Kocer, Alkris Warren, Kevan Bell, Marian Boktor, Mustafa Yavuz, Eihab Abdel-Rahman, and Parsin Haji Reza

Biomed. Opt. Express 13(11), 5643-5653 (2022)  View: HTML | PDF

Coarse-scale optoretinography (CoORG) with extended field-of-view for normative characterization

Xiaoyun Jiang, Teng Liu, Vimal Prabhu Pandiyan, Emily Slezak, and Ramkumar Sabesan

Biomed. Opt. Express 13(11), 5989-6002 (2022)  View: HTML | PDF

Finding intracellular lipid droplets from the single-cell biolens’ signature in a holographic flow-cytometry assay

Daniele Pirone, Daniele G. Sirico, Martina Mugnano, Danila Del Giudice, Ivana Kurelac, Beatrice Cavina, Pasquale Memmolo, Lisa Miccio, and Pietro Ferraro

Biomed. Opt. Express 13(11), 5585-5598 (2022)  View: HTML | PDF

Development of a preclinical CCD-based temperature modulated fluorescence tomography platform

Farouk Nouizi, Hakan Erkol, Deniz Nikkhah, Tiffany C. Kwong, and Gultekin Gulsen

Biomed. Opt. Express 13(11), 5740-5752 (2022)  View: HTML | PDF

Sub-mm resolution tomographic imaging in turbid media by an ultra-high density multichannel approach

Ning Zhang, Quan Zhang, and Arto Nurmikko

Biomed. Opt. Express 13(11), 5926-5936 (2022)  View: HTML | PDF

Development of a theranostic preclinical fluorescence molecular tomography/cone beam CT-guided irradiator platform

Farouk Nouizi, Jamison Brooks, Darren M. Zuro, Susanta K. Hui, and Gultekin Gulsen

Biomed. Opt. Express 13(11), 6100-6112 (2022)  View: HTML | PDF

In vivo monitoring of vascularization and oxygenation of tumor xenografts using optoacoustic microscopy and diffuse optical spectroscopy

K. G. Akhmedzhanova, A. A. Kurnikov, D. A. Khochenkov, Yu. A. Khochenkova, A. M. Glyavina, V. V. Kazakov, A. V. Yudintsev, A. V. Maslennikova, I. V. Turchin, P. V. Subochev, and A. G. Orlova

Biomed. Opt. Express 13(11), 5695-5708 (2022)  View: HTML | PDF

High-density diffuse correlation tomography with enhanced depth localization and minimal surface artefacts

Ria Paul, K. Murali, and Hari M. Varma

Biomed. Opt. Express 13(11), 6081-6099 (2022)  View: HTML | PDF

Automated endocardial cushion segmentation and cellularization quantification in developing hearts using optical coherence tomography

Shan Ling, Jiawei Chen, Maryse Lapierre-Landry, Junwoo Suh, Yehe Liu, Michael W. Jenkins, Michiko Watanabe, Stephanie M. Ford, and Andrew M. Rollins

Biomed. Opt. Express 13(11), 5599-5615 (2022)  View: HTML | PDF

MC-GAT: multi-layer collaborative generative adversarial transformer for cholangiocarcinoma classification from hyperspectral pathological images

Yuan Li, Xu Shi, Liping Yang, Chunyu Pu, Qijuan Tan, Zhengchun Yang, and Hong Huang

Biomed. Opt. Express 13(11), 5794-5812 (2022)  View: HTML | PDF

Deep attentive convolutional neural network for automatic grading of imbalanced diabetic retinopathy in retinal fundus images

Feng Li, Shiqing Tang, Yuyang Chen, and Haidong Zou

Biomed. Opt. Express 13(11), 5813-5835 (2022)  View: HTML | PDF  [Suppl. Mat. (1)]

Self-supervised next view prediction for limited-angle optical projection tomography

Hao Zhang, BinBing Liu, and Peng Fei

Biomed. Opt. Express 13(11), 5952-5961 (2022)  View: HTML | PDF  [Suppl. Mat. (1)]

TCGAN: a transformer-enhanced GAN for PET synthetic CT

Jitao Li, Zongjin Qu, Yue Yang, Fuchun Zhang, Meng Li, and Shunbo Hu

Biomed. Opt. Express 13(11), 6003-6018 (2022)  View: HTML | PDF  [Suppl. Mat. (1)]

Blood pressure estimation by spatial pulse-wave dynamics in a facial video

Kaito Iuchi, Ryogo Miyazaki, George C. Cardoso, Keiko Ogawa-Ochiai, and Norimichi Tsumura

Biomed. Opt. Express 13(11), 6035-6047 (2022)  View: HTML | PDF

3D super-resolution live-cell imaging with radial symmetry and Fourier light-field microscopy

Keyi Han, Xuanwen Hua, Vishwa Vasani, Ge-Ah R. Kim, Wenhao Liu, Shuichi Takayama, and Shu Jia

Biomed. Opt. Express 13(11), 5574-5584 (2022)  View: HTML | PDF

Increasing the field-of-view in oblique plane microscopy via optical tiling

Bingying Chen, Bo-Jui Chang, Felix Y. Zhou, Stephan Daetwyler, Etai Sapoznik, Benjamin A Nanes, Isabella Terrazas, Gabriel M. Gihana, Lizbeth Perez Castro, Isaac S. Chan, Maralice Conacci-Sorrell, Kevin M. Dean, Alfred Millett-Sikking, Andrew G. York, and Reto Fiolka

Biomed. Opt. Express 13(11), 5616-5627 (2022)  View: HTML | PDF  [Suppl. Mat. (6)]

Low-intensity illumination for lensless digital holographic microscopy with minimized sample interaction

Bartosz Mirecki, Mikołaj Rogalski, Piotr Arcab, Piotr Rogujski, Luiza Stanaszek, Michał Józwik, and Maciej Trusiak

Biomed. Opt. Express 13(11), 5667-5682 (2022)  View: HTML | PDF  [Suppl. Mat. (1)]

Numerical refractive index correction for the stitching procedure in tomographic quantitative phase imaging

Piotr Stępień, Michał Ziemczonok, Małgorzata Kujawińska, Maria Baczewska, Luca Valenti, Alessandro Cherubini, Elia Casirati, and Wojciech Krauze

Biomed. Opt. Express 13(11), 5709-5720 (2022)  View: HTML | PDF

Three-dimensional bi-functional refractive index and fluorescence microscopy (BRIEF)

Yi Xue, David Ren, and Laura Waller

Biomed. Opt. Express 13(11), 5900-5908 (2022)  View: HTML | PDF  [Suppl. Mat. (1)]

Near-infrared, wavelength, and illumination scanning holographic tomography

Paweł Ossowski, Arkadiusz Kuś, Wojciech Krauze, Szymon Tamborski, Michał Ziemczonok, Łukasz Kuźbicki, Maciej Szkulmowski, and Małgorzata Kujawińska

Biomed. Opt. Express 13(11), 5971-5988 (2022)  View: HTML | PDF

Super-multiplexing excitation spectral microscopy with multiple fluorescence bands

Kun Chen, Wan Li, and Ke Xu

Biomed. Opt. Express 13(11), 6048-6060 (2022)  View: HTML | PDF

Compact structured illumination microscopy with high spatial frequency diffractive lattice patterns

Cilong Zhang, Ning Xu, and Qiaofeng Tan

Biomed. Opt. Express 13(11), 6113-6123 (2022)  View: HTML | PDF  [Suppl. Mat. (2)]

Optical biosensor based on SERS with signal calibration function for quantitative detection of carcinoembryonic antigen

Tingyin Wang, Youzhi Zhu, Shuyun Weng, Xueliang Lin, Kien Voon Kong, Youliang Weng, Xianggang Jia, Rong Chen, Duo Lin, and Shangyuan Feng

Biomed. Opt. Express 13(11), 5962-5970 (2022)  View: HTML | PDF

Skin cancer margin detection using nanosensitive optical coherence tomography and a comparative study with confocal microscopy

Rajib Dey, Sergey Alexandrov, Peter Owens, Jack Kelly, Sine Phelan, and Martin Leahy

Biomed. Opt. Express 13(11), 5654-5666 (2022)  View: HTML | PDF  [Suppl. Mat. (1)]

Three-dimensional mechanical characterization of murine skeletal muscle using quantitative micro-elastography

Erin M. Lloyd, Matt S. Hepburn, Jiayue Li, Alireza Mowla, Yongsung Hwang, Yu Suk Choi, Miranda D. Grounds, and Brendan F. Kennedy

Biomed. Opt. Express 13(11), 5879-5899 (2022)  View: HTML | PDF

Using beam-offset optical coherence tomography to reconstruct backscattered photon profiles in scattering media

Weiming Xu and Hui Wang

Biomed. Opt. Express 13(11), 6124-6135 (2022)  View: HTML | PDF  [Suppl. Mat. (1)]

Integrating a pressure sensor with an OCT handheld probe to facilitate imaging of microvascular information in skin tissue beds

Yaping Shi, Jie Lu, Nhan Le, and Ruikang K. Wang

Biomed. Opt. Express 13(11), 6153-6166 (2022)  View: HTML | PDF

Optical anisotropy composition of benign and malignant prostate tissues revealed by Mueller-matrix imaging

Oleksii Sieryi, Yuriy Ushenko, Volodimir Ushenko, Olexander Dubolazov, Anastasia V. Syvokorovskaya, Oleh Vanchulyak, Alexander G. Ushenko, Mykhailo Gorsky, Yuriy Tomka, Alexander Bykov, Wenjun Yan, and Igor Meglinski

Biomed. Opt. Express 13(11), 6019-6034 (2022)  View: HTML | PDF

Inter-day repeatability assessment of human retinal blood flow using clinical laser speckle contrast imaging

Chen Qiu, Josephine Situ, Sheng-Ya Wang, and Ehsan Vaghefi

Biomed. Opt. Express 13(11), 6136-6152 (2022)  View: HTML | PDF

Spin exchange optically pumped nuclear spin self compensation system for moving magnetoencephalography measurement

Yao Chen, Libo Zhao, Yintao Ma, Mingzhi Yu, Yanbin Wang, Ning Zhang, Kai Wei, and Zhuangde Jiang

Biomed. Opt. Express 13(11), 5937-5951 (2022)  View: HTML | PDF

Photoacoustic imaging to monitor outcomes during hyperbaric oxygen therapy: validation in a small cohort and case study in a bilateral chronic ischemic wound

Yash Mantri, Aditya Mishra, Caesar A. Anderson, and Jesse V. Jokerst

Biomed. Opt. Express 13(11), 5683-5694 (2022)  View: HTML | PDF  [Suppl. Mat. (4)]

Learned regularization for image reconstruction in sparse-view photoacoustic tomography

Tong Wang, Menghui He, Kang Shen, Wen Liu, and Chao Tian

Biomed. Opt. Express 13(11), 5721-5737 (2022)  View: HTML | PDF

Continuous-wave parallel interferometric near-infrared spectroscopy (CW πNIRS) with a fast two-dimensional camera

Saeed Samaei, Klaudia Nowacka, Anna Gerega, Żanna Pastuszak, and Dawid Borycki

Biomed. Opt. Express 13(11), 5753-5774 (2022)  View: HTML | PDF

Visible near-infrared hyperspectral imaging and supervised classification for the detection of small intestinal necrosis tissue in vivo

LeChao Zhang, DanFei Huang, XiaoJing Chen, LiBin Zhu, XiaoQing Chen, ZhongHao Xie, GuangZao Huang, JunZhao Gao, Wen Shi, and GuiHua Cui

Biomed. Opt. Express 13(11), 6061-6080 (2022)  View: HTML | PDF

Analytical ray transfer matrix for the crystalline lens

Rafael Navarro, Veronica Lockett-Ruiz, and José L. López

Biomed. Opt. Express 13(11), 5836-5848 (2022)  View: HTML | PDF  [Suppl. Mat. (1)]

Evaluation of a liquid membrane-based tunable lens and a solid-state LIDAR camera feedback system for presbyopia

Rajat Agarwala, Olga Lukashova Sanz, Immanuel P. Seitz, Felix F. Reichel, and Siegfried Wahl

Biomed. Opt. Express 13(11), 5849-5859 (2022)  View: HTML | PDF

ERA-WGAT: Edge-enhanced residual autoencoder with a window-based graph attention convolutional network for low-dose CT denoising

Han Liu, Peixi Liao, Hu Chen, and Yi Zhang

Biomed. Opt. Express 13(11), 5775-5793 (2022)  View: HTML | PDF

Comparison of fluorescence lifetime and multispectral imaging for quantitative multiplexing in biological tissue: erratum

Rahul Pal and Anand T. N. Kumar

Biomed. Opt. Express 13(11), 5738-5739 (2022)  View: HTML | PDF