Theoretical model for en face optical coherence tomography imaging and its application to volumetric differential contrast imaging

Kiriko Tomita, Shuichi Makita, Naoki Fukutake, Rion Morishita, Ibrahim Abd El-Sadek, Pradipta Mukherjee, Antonia Lichtenegger, Junya Tamaoki, Lixuan Bian, Makoto Kobayashi, Tomoko Mori, Satoshi Matsusaka, and Yoshiaki Yasuno

Biomed. Opt. Express 14(7), 3100-3124 (2023)  View: HTML | PDF  [Suppl. Mat. (2)]

SmartOCT: smartphone-integrated optical coherence tomography

Joseph D. Malone, Iftak Hussain, and Audrey K. Bowden

Biomed. Opt. Express 14(7), 3138-3151 (2023)  View: HTML | PDF

Geometrically accurate real-time volumetric visualization of the middle ear using optical coherence tomography

Joshua D. Farrell, Junzhe Wang, Dan MacDougall, Xiaojie Yang, Kimberly Brewer, Floor Couvreur, Nael Shoman, David P Morris, and Robert B. A. Adamson

Biomed. Opt. Express 14(7), 3152-3171 (2023)  View: HTML | PDF  [Suppl. Mat. (11)]

Three-dimensional imaging and quantification of mouse ovarian follicles via optical coherence tomography

Marcello Magri Amaral, Aixia Sun, Yilin Li, Chao Ren, Anh Blue Truong, Saumya Nigam, Zexu Jiao, Ping Wang, and Chao Zhou

Biomed. Opt. Express 14(7), 3213-3224 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Enhanced 3D visualization of human fallopian tube morphology using a miniature optical coherence tomography catheter

Hongbo Luo, Shuying Li, Sitai Kou, Yixiao Lin, Ian S. Hagemann, and Quing Zhu

Biomed. Opt. Express 14(7), 3225-3233 (2023)  View: HTML | PDF

Annotation-efficient learning for OCT segmentation

Haoran Zhang, Jianlong Yang, Ce Zheng, Shiqing Zhao, and Aili Zhang

Biomed. Opt. Express 14(7), 3294-3307 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Methods for real-time feature-guided image fusion of intrasurgical volumetric optical coherence tomography with digital microscopy

Robert M. Trout, Christian Viehland, Jianwei D. Li, William Raynor, Al-Hafeez Dhalla, Lejla Vajzovic, Anthony N. Kuo, Cynthia A. Toth, and Joseph A. Izatt

Biomed. Opt. Express 14(7), 3308-3326 (2023)  View: HTML | PDF  [Suppl. Mat. (3)]

Correcting spatial-spectral crosstalk and chromatic aberrations in broadband line-scan spectral-domain OCT images

Le Han and Kostadinka Bizheva

Biomed. Opt. Express 14(7), 3344-3361 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Dynamic optical coherence tomography for cell analysis [Invited]

Salvatore Azzollini, Tual Monfort, Olivier Thouvenin, and Kate Grieve

Biomed. Opt. Express 14(7), 3362-3379 (2023)  View: HTML | PDF

A machine learning framework for the quantification of experimental uveitis in murine OCT

Youness Mellak, Alin Achim, Amy Ward, Lindsay Nicholson, and Xavier Descombes

Biomed. Opt. Express 14(7), 3413-3432 (2023)  View: HTML | PDF

Advancing full-field metrology: rapid 3D imaging with geometric phase ferroelectric liquid crystal technology in full-field optical coherence microscopy

Wei Zheng, Shan S. Kou, Colin J. R. Sheppard, and Maitreyee Roy

Biomed. Opt. Express 14(7), 3433-3445 (2023)  View: HTML | PDF

Interface self-referenced dynamic full-field optical coherence tomography

Tual Monfort, Salvatore Azzollini, Tasnim Ben Yacoub, Isabelle Audo, Sacha Reichman, Kate Grieve, and Olivier Thouvenin

Biomed. Opt. Express 14(7), 3491-3505 (2023)  View: HTML | PDF  [Suppl. Mat. (2)]

Computational 3D resolution enhancement for optical coherence tomography with a narrowband visible light source

Jos de Wit, George-Othon Glentis, and Jeroen Kalkman

Biomed. Opt. Express 14(7), 3532-3554 (2023)  View: HTML | PDF  [Suppl. Mat. (3)]

Two-photon microendoscope for label-free imaging in stereotactic neurosurgery

Tarah A. Welton, Nicholas M. George, Baris N. Ozbay, Arianna Gentile Polese, Gregory Osborne, Gregory L. Futia, J. Keenan Kushner, Bette Kleinschmidt-DeMasters, Allyson L. Alexander, Aviva Abosch, Steven Ojemann, Diego Restrepo, and Emily A. Gibson

Biomed. Opt. Express 14(7), 3705-3725 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Visual and Physiological Optics: introduction to the joint feature issue in Biomedical Optics Express and Journal of the Optical Society of America A

Juan Tabernero, Linda Lundström, Christina Schwarz, and Brian Vohnsen

Biomed. Opt. Express 14(7), 3853-3855 (2023)  View: HTML | PDF

Spatiotemporal defocus sensitivity function of the human visual system

Victor Rodriguez-Lopez, Wilson Geisler, and Carlos Dorronsoro

Biomed. Opt. Express 14(7), 3654-3670 (2023)  View: HTML | PDF

Comparison of optical myopia control interventions: effect on peripheral image quality and vision

Petros Papadogiannis, Charlie Börjeson, and Linda Lundström

Biomed. Opt. Express 14(7), 3125-3137 (2023)  View: HTML | PDF

Absolute prediction of relative changes in contrast sensitivity with aberrations using a single metric of retinal image quality

Charles Leroux, Sarah Ouadi, Conor Leahy, Isabelle Marc, Christophe Fontvieille, and Fabrice Bardin

Biomed. Opt. Express 14(7), 3203-3212 (2023)  View: HTML | PDF

Optical characterisation of holographic diffusers and Bangerter foils for treatment of amblyopia

Matthew Hellis, Suzanne Martin, Matthew Sheehan, and Kevin Murphy

Biomed. Opt. Express 14(7), 3279-3293 (2023)  View: HTML | PDF

Review of recent advances in frequency-domain near-infrared spectroscopy technologies [Invited]

Xinkai Zhou, Yunjia Xia, Julie Uchitel, Liam Collins-Jones, Shufan Yang, Rui Loureiro, Robert J. Cooper, and Hubin Zhao

Biomed. Opt. Express 14(7), 3234-3258 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Miniaturised dual-modality all-optical ultrasound probe for laser interstitial thermal therapy (LITT) monitoring

Shaoyan Zhang, Semyon Bodian, Edward Z. Zhang, Paul C. Beard, Sacha Noimark, Adrien E. Desjardins, and Richard J. Colchester

Biomed. Opt. Express 14(7), 3446-3457 (2023)  View: HTML | PDF

Fourier ptychographic microscopy image enhancement with bi-modal deep learning

Lyes Bouchama, Bernadette Dorizzi, Marc Thellier, Jacques Klossa, and Yaneck Gottesman

Biomed. Opt. Express 14(7), 3172-3189 (2023)  View: HTML | PDF

Deep learning network with differentiable dynamic programming for retina OCT surface segmentation

Hui Xie, Weiyu Xu, Ya Xing Wang, and Xiaodong Wu

Biomed. Opt. Express 14(7), 3190-3202 (2023)  View: HTML | PDF

Comparison of denoising tools for the reconstruction of nonlinear multimodal images

Rola Houhou, Elsie Quansah, Tobias Meyer-Zedler, Michael Schmitt, Franziska Hoffmann, Orlando Guntinas-Lichius, Jürgen Popp, and Thomas Bocklitz

Biomed. Opt. Express 14(7), 3259-3278 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Single-shot quantitative phase contrast imaging based on deep learning

Yu-Chun Lin, Yuan Luo, Ying-Ju Chen, Huei-Wen Chen, Tai-Horng Young, and Hsuan-Ming Huang

Biomed. Opt. Express 14(7), 3458-3468 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Automated inter-device 3D OCT image registration using deep learning and retinal layer segmentation

David Rivas-Villar, Alice R. Motschi, Michael Pircher, Christoph K. Hitzenberger, Markus Schranz, Philipp K. Roberts, Ursula Schmidt-Erfurth, and Hrvoje Bogunović

Biomed. Opt. Express 14(7), 3726-3747 (2023)  View: HTML | PDF

Investigation of refractive index dynamics during in vitro embryo development using off-axis digital holographic microscopy

George O. Dwapanyin, Darren J. X. Chow, Tiffany C. Y. Tan, Nicolas S. Dubost, Josephine M. Morizet, Kylie R. Dunning, and Kishan Dholakia

Biomed. Opt. Express 14(7), 3327-3342 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Short-wavelength excitation two-photon intravital microscopy of endogenous fluorophores

Ting Wu, Jiuling Liao, Feng Xiang, Jia Yu, Yufeng Gao, Lina Liu, Shiwei Ye, Hui Li, Kebin Shi, and Wei Zheng

Biomed. Opt. Express 14(7), 3380-3396 (2023)  View: HTML | PDF  [Suppl. Mat. (3)]

In-vitro quantitative measurement and analysis of the photosensitivity of cells to a weak pulse laser

Lan Tian, Ming Zeng, Geng Tian, and Jingjing Xu

Biomed. Opt. Express 14(7), 3584-3596 (2023)  View: HTML | PDF

Modelling red blood cell optical trapping by machine learning improved geometrical optics calculations

R. Tognato, D. Bronte Ciriza, O. M. Maragò, and P. H. Jones

Biomed. Opt. Express 14(7), 3748-3762 (2023)  View: HTML | PDF

Four-color fluorescence cross-correlation spectroscopy with one laser and one camera

Sonali A. Gandhi, Matthew A. Sanders, James G. Granneman, and Christopher V. Kelly

Biomed. Opt. Express 14(7), 3812-3827 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Highly sensitive and label-free detection of biotin using a liquid crystal-based optofluidic biosensor

Haonan Wang, Tianhua Xu, Ziyihui Wang, Yize Liu, Huaixu Chen, Junfeng Jiang, and Tiegen Liu

Biomed. Opt. Express 14(7), 3763-3774 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Fractal-based aberration-corrected full-field OCT

Yue Zhu, Yuan Zhou, and Zhenyan Guo

Biomed. Opt. Express 14(7), 3775-3797 (2023)  View: HTML | PDF

Semi-supervised OCT lesion segmentation via transformation-consistent with uncertainty and self-deep supervision

Hailan Shen, Qiao Yang, Zailiang Chen, Ziyu Ye, Peishan Dai, and Xuanchu Duan

Biomed. Opt. Express 14(7), 3828-3840 (2023)  View: HTML | PDF

Full-Stokes polarization laser-induced breakdown spectroscopy detection of infiltrative glioma boundary tissue

Geer Teng, Qianqian Wang, Qun Hao, Axin Fan, Haifeng Yang, Xiangjun Xu, Guoyan Chen, Kai Wei, Zhifang Zhao, M. Nouman Khan, Bushra Sana Idrees, Mengyu Bao, Tianzhong Luo, Yongyue Zheng, and Bingheng Lu

Biomed. Opt. Express 14(7), 3469-3490 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Performance assessment of probe-based Raman spectroscopy systems for biomedical analysis

Sean Fitzgerald, Eric Marple, and Anita Mahadevan-Jansen

Biomed. Opt. Express 14(7), 3597-3609 (2023)  View: HTML | PDF

Handheld photoacoustic imaging of indocyanine green clearance for real-time quantitative evaluation of liver reserve function

Hai Zhang, Si-Lue Zeng, Yun-Zhu Wu, Ruo-Xin Zhang, Liang-Jian Liu, Qiang Xue, Jing-Qin Chen, Kenneth K. Y. Wong, Jin-Feng Xu, Ya-Guang Ren, Chi-Hua Fang, and Cheng-Bo Liu

Biomed. Opt. Express 14(7), 3610-3621 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Mid-infrared photoacoustic spectroscopy based on ultrasound detection for blood component analysis

Ryota Sasaki, Saiko Kino, and Yuji Matsuura

Biomed. Opt. Express 14(7), 3841-3852 (2023)  View: HTML | PDF

Impact of experimental setup parameters on the measurement of articular cartilage optical properties in the visible and short near-infrared spectral bands

Iman Kafian-Attari, Ervin Nippolainen, Florian Bergmann, Arash Mirhashemi, Petri Paakkari, Florian Foschum, Alwin Kienle, Juha Töyräs, and Isaac O. Afara

Biomed. Opt. Express 14(7), 3397-3412 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Two-layered blood-lipid phantom and method to determine absorption and oxygenation employing changes in moments of DTOFs

Aleh Sudakou, Heidrun Wabnitz, André Liemert, Martin Wolf, and Adam Liebert

Biomed. Opt. Express 14(7), 3506-3531 (2023)  View: HTML | PDF

Serum-based Raman spectroscopic diagnosis of blast-induced brain injury in a rat model

Meilan Ge, Yuye Wang, Tong Wu, Haibin Li, Chuanyan Yang, Tunan Chen, Hua Feng, Degang Xu, and Jianquan Yao

Biomed. Opt. Express 14(7), 3622-3634 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Normative cerebral microvascular blood flow waveform morphology assessed with diffuse correlation spectroscopy

Tara M. Urner, Kyle R. Cowdrick, Rowan O. Brothers, Tisha Boodooram, Hongting Zhao, Vidisha Goyal, Eashani Sathialingam, Ayesha Quadri, Katherine Turrentine, Mariam M. Akbar, Sydney E. Triplett, Shasha Bai, and Erin M. Buckley

Biomed. Opt. Express 14(7), 3635-3653 (2023)  View: HTML | PDF  [Suppl. Mat. (1)]

Complete head cerebral sensitivity mapping for diffuse correlation spectroscopy using subject-specific magnetic resonance imaging models: errata

Melissa M. Wu, Katherine Perdue, Suk-Tak Chan, Kimberly A. Stephens, Bin Deng, Maria Angela Franceschini, and Stefan A. Carp

Biomed. Opt. Express 14(7), 3343-3343 (2023)  View: HTML | PDF