Preliminary experimental investigation of the spatial resolution of a 156 channels fNIRs system with Silicon Photomultiplier

Arjunan Mozhikunnam Sreekrishnan, Roberto Pagano, Giovanni Maira, and Salvatore Lombardo

BM2B.2 Optics and the Brain (BRAIN) 2023 View: PDF

NinjaNIRS: An Open-Source Ecosystem for Wearable, Whole-Head and High Density fNIRS with EEG Co-Localization

W. J. O’Brien, A. Ortega, D. Rogers, M. A. Yücel, A. von Lühmann, S. Kiran, T. Ellis, D. Somers, A. Cronin-Golomb, D. A. Boas, and B. Zimmermann

BM2B.3 Optics and the Brain (BRAIN) 2023 View: PDF

A remote-control, smartphone-based automatic 3D scanning system for fNIRS/DOT applications

Yunjia Xia, Kui Wang, Addison Billing, Robert J. Cooper, and Hubin Zhao

BM2B.4 Optics and the Brain (BRAIN) 2023 View: PDF

A Whole Head Ultra-High Density Diffuse Optical Tomography System for Naturalistic and Resting State Functional Human Brain Mapping

Morgan Fogarty, Sean M. Rafferty, Anthony C. O’Sullivan, Calamity F. Svoboda, Zachary E. Markow, Edward J. Richter, Tessa George, Kelsey King, Dana Wilhelm, Kalyan Tripathy, Jason W. Trobaugh, Adam T. Eggebrecht, and Joseph P. Culver

BM2B.5 Optics and the Brain (BRAIN) 2023 View: PDF

Next-generation head-mounted microscopes for large-scale neural recordings

Joseph R. Scherrer, Galen F. Lynch, Jie J. Zhang, and Michale S. Fee

BM3B.2 Optics and the Brain (BRAIN) 2023 View: PDF

Miniaturized and Thin 3D Microscope with Learnable Real-time Reconstruction

Feng Tian and Weijian Yang

BM3B.3 Optics and the Brain (BRAIN) 2023 View: PDF

Large Scale Neuron Recording under Deep Nucleus Stimulation in Freely Behaving Mice

Lekang Yuan, Yuanlong Zhang, Hanyun Xu, Jiamin Wu, Guihua Xiao, Hao Xie, and Qionghai Dai

BM3B.5 Optics and the Brain (BRAIN) 2023 View: PDF

Application of Machine Learning to Direct Calcium Indicator Engineering

Sarah J. Wait, Justin Daho Lee, Michael Rappleye, and Andre Berndt

BM4B.2 Optics and the Brain (BRAIN) 2023 View: PDF

A Color Spectrum of Genetically Encoded Glutamate Indicators

Azariah Coblentz, Nikki Tjahjono, Peter Freitas, Rochelin Dalangin, Robert Campbell, Lin Tian, and Alessio Andreoni

BM4B.3 Optics and the Brain (BRAIN) 2023 View: PDF

In Vivo Imaging of Neuronal Activity and Blood Vessels in AAV-Injected Mice

Anaïs Parrot, Jérémie Guilbert, Pierre Girard-Collins, and Michèle Desjardins

BM4B.5 Optics and the Brain (BRAIN) 2023 View: PDF

Interferometric dynamic laser speckle imaging

Sharvari Zilpelwar, Xiaojun Cheng, and David A. Boas

BTh1B.2 Optics and the Brain (BRAIN) 2023 View: PDF

Label-free three-photon imaging of intact human cerebral organoids for tracking early events in brain development

Murat Yildirim, Chloe Delepine, Danielle Feldman, Vincent Pham, Stephanie Chou, Jacque Pak Kan Ip, Alexi Nott, Li-Huei Tsai, Guo-li Ming, Peter T.C. So, and Mriganka Sur

BTh1B.3 Optics and the Brain (BRAIN) 2023 View: PDF

Imaging photoplethysmography for assessing stimulus-evoked hemodynamics in mouse barrel cortex

Qinghua He, Yuandong Li, and Ruikang K. Wang

BTh1B.5 Optics and the Brain (BRAIN) 2023 View: PDF

Brief Disruptions in Capillary Flow Result in Rapid onset of Hypoxia

John Giblin, Sreekanth Kura, Juan Luis Ugarte Nunez, Juncheng Zhang, Gülce Küreli, John Jiang, Ichun A. Chen, Kıvılcım Kılıç, and David A. Boas

BTh1B.6 Optics and the Brain (BRAIN) 2023 View: PDF

Fiber-Based Speckle Contrast Optical Tomography for Neuroimaging in Humans: Simulation of High-Density vs. Sparse Arrays and In Vivo Human Measurements

Chen-Hao P. Lin, Wiete Fehner, Inema E. Orukari, Lisa Kobayashi Frisk, Alvin Agato, Manish Verma, Anthony O'Sullivan, Calamity Svoboda, Sumana Chetia, Adam T. Eggebrecht, Turgut Durduran, Joseph P. Culver, and Jason W. Trobaugh

BTh2B.2 Optics and the Brain (BRAIN) 2023 View: PDF

Toward Real-time In-Vivo Diagnosis of Brain Tumors using Quantitative Oblique Back-illumination Microscopy

Zhe Guang, Paloma Casteleiro Costa, Joshua Lerner, and Francisco E Robles

BTh2B.3 Optics and the Brain (BRAIN) 2023 View: PDF

Intraoperative detection of glioma tumor infiltration: Comparative study of FLIm vs MRI-based neuronavigation performance

Silvia Noble Anbunesan, Alba Alfonso-Garcia, Mohamed Hasan, Robert A Riestenberg, Matthew Bobinski, Han Sung Lee, Lee-Way Jin, Orin Bloch, and Laura Marcu

BTh2B.5 Optics and the Brain (BRAIN) 2023 View: PDF

Human Neuronavigation Using Coherent Anti-Sokes Raman Scattering Spectroscopy and Diffuse Reflectance Spectroscopy for Deep Brain Stimulation Surgery

Mireille Quémener, Alexandre Bédard, Thomas Charland, Damon DePaoli, Valérie Dionne, Anthony Drouin, Séabstien Jerczynski, Shadi Masoumi, Elahe Parham, Anaïs Parrot, Valérie Pineau Noël, Antoine Rousseau, Jonathan Roussel, Léo Cantin, Martin Parent, and Daniel C. Côté

BTh2B.6 Optics and the Brain (BRAIN) 2023 View: PDF

The Contribution of Cortical Neuronal Populations to Resting-State Cerebrovascular Regulation Revealed by Two-Photon Microscopy Imaging

Adiya Rakymzhan and Alberto Vazquez

BTu1B.2 Optics and the Brain (BRAIN) 2023 View: PDF

Mapping Local and Global Interactions between Parvalbumin Inhibitory Neurons and Excitatory Neurons over the Cortex in Awake Mice

Xiaodan Wang, Annie R. Bice, and Adam Q. Bauer

BTu1B.4 Optics and the Brain (BRAIN) 2023 View: PDF

Deep Learning Driven Light-Based Motor Mapping of Multiple Limb Movements in Mice Reveals Behaviorally Relevant Movements

Nischal Khanal, Jonah Padawer-Curry, Kevin Schulte, Trevor Voss, Annie R. Bice, Jin-Moo Lee, and Adam Q. Bauer

BTu1B.5 Optics and the Brain (BRAIN) 2023 View: PDF

Development of 3-Photon Functional Imaging in Deep Layers of Macaque Cortex

Kevin T. Takasaki, Gaku Hatanaka, Soumya Chatterjee, Pooja Balaram, Taekjun Kim, Celeste Dylla, Farzaneh Abolmaali, R. Clay Reid, Anitha Pasupathy, Wyeth Bair, and Jack Waters

BTu1B.6 Optics and the Brain (BRAIN) 2023 View: PDF

Visualizing drug actions on dendrites: psilocybin and other classic psychedelics

Ling-Xiao Shao, Clara Liao, Ian Gregg, Pasha A Davoudian, Neil K Savalia, Kristina Delagarza, and Alex C. Kwan

BTu2B.2 Optics and the Brain (BRAIN) 2023 View: PDF

5-HT2A Receptor Agonism Changes Neuronal Network Activity and Disrupts Neurovascular Coupling in Mice

Jonah Padawer-Curry, Joshua S. Siegel, Jordan G. McCall, Ginger E. Nicol, and Adam Q. Bauer

BTu2B.3 Optics and the Brain (BRAIN) 2023 View: PDF

A Two-layer Modified Beer-Lambert Algorithm for Optical Monitoring of Critical Closing Pressure

Wesley B. Baker, R. Forti, P. Heye, K. Heye, Y. Lin, K.N. Andersen, J. Jahnavi, J. Breimann, H. Gaudio, S. Morton, A. G. Yodh, D.J. Licht, B.R. White, M. Hwang, T.J. Kilbaugh, and T.S. Ko

BTu3B.2 Optics and the Brain (BRAIN) 2023 View: PDF

Brain hemodynamics and oxygen metabolism in neonates with transposition of the great arteries

Laurence Charbonneau, Rasheda Arman Chowdhury, Bohdana Marandyuk, Rong Wu, Nancy Poirier, Joaquim Miró, Anne-Monique Nuyt, Marie-Josée Raboisson, and Mathieu Dehaes

BTu3B.3 Optics and the Brain (BRAIN) 2023 View: PDF

Applying a New Dynamic Model to Near-Infrared Spectroscopy Measurements of Cerebral Changes During Cardiac Arrest and Cardiopulmonary Resuscitation

Vladislav Toronov, Olivia Rennie, Nima Khalifehsoltani, Alexandra Marquez, Rohit Mohindra, and Steve Lin

BTu3B.5 Optics and the Brain (BRAIN) 2023 View: PDF

Measurements of human cerebral blood flow changes with speckle contrast optical spectroscopy

Xiaojun Cheng, Sharvari Zilpelwar, Byungchan Kim, Edbert J. Sie, Francesco Marsili, and David A. Boas

BTu3B.6 Optics and the Brain (BRAIN) 2023 View: PDF

Optimization of Confocal Bessel Beam Light-sheet for Axonal Connectomics

Kevin T. Takasaki, Olga Gliko, Russel Torres, Pooja Balaram, Ayana Hellevik, Emily Turschak, Bryan MacLennan, Sam Kinn, Eric Perlman, and R. Clay Reid

BW1B.2 Optics and the Brain (BRAIN) 2023 View: PDF

Reconstruction of Nerve Fiber Orientations in Cell-body Stained Histological Brain Sections using Computational Scattered Light Imaging

Franca auf der Heiden, Marios Georgiadis, Michael Zeineh, Katrin Amunts, Markus Axer, and Miriam Menzel

BW1B.3 Optics and the Brain (BRAIN) 2023 View: PDF

Birefringence Microscope Design and Sample Preparation Exigencies for High-resolution Imaging of Myelin Degradation

Alexander J. Gray, Nathan Blanke, Rhiannon Robinson, Douglas L. Rosene, and Irving J. Bigio

BW1B.5 Optics and the Brain (BRAIN) 2023 View: PDF

Enhanced determination of nerve fiber orientations by introducing iterative thresholds in Computational Scattered Light Imaging

Jan André Reuter, David Gräßel, Katrin Amunts, Markus Axer, and Miriam Menzel

BW1B.6 Optics and the Brain (BRAIN) 2023 View: PDF

High-speed Two-photon Microscopy with Adaptive Sampling

Yunyang Li, Junjie Hu, Shu Guo, and Weijian Yang

BW3B.2 Optics and the Brain (BRAIN) 2023 View: PDF

DEEP2: Deep Learning Powered De-scattering with Excitation Patterning (DEEP)

Navodini Wijethilake, Mithunjha Anandakumar, Cheng Zheng, Peter T. C. So, Murat Yildirim, and Dushan N. Wadduwage

BW3B.3 Optics and the Brain (BRAIN) 2023 View: PDF

Differentiable Adaptive Optics and Light Shaping in Two-Photon Microscopy

Ivan Vishniakou and Johannes D. Seelig

BW3B.5 Optics and the Brain (BRAIN) 2023 View: PDF

Imaging of dendrites and sparse interneuronal networks with 3D random access microscopy

Balázs Rózsa, Zoltán Szadai, Linda Judák, Balázs Chiovini, Gábor Juhász, Katalin Ócsai, Dénes Pálfi, Zsolt Mezriczky, Gergely Szalay, Gergely Katona, Anna Mihály, Áron Szepesi, Zoltán Mucsi, Botond Roska, Hyun-Jae Pi, Quentin Chevy, Florin Albeanu, and Adam Kepecs

BW3B.6 Optics and the Brain (BRAIN) 2023 View: PDF

Synaptic resolution two-photon stimulation and imaging of neural activity with Bessel beam light-sheet microscopy

Dongli Xu, Jun B. Ding, and Leilei Peng

BW4B.3 Optics and the Brain (BRAIN) 2023 View: PDF

Aberration Correction in Long GRIN-Based Microendoscopes using 3D Printed Polymer Lenses

Chiara Nardin, Andrea Sattin, Innem V. Reddy, Carlo Liberale, and Tommaso Fellin

BW4B.4 Optics and the Brain (BRAIN) 2023 View: PDF

Augmented optical neural implants using plasmonic nanomodulators integrated on multimode fibers

Filippo Pisano, Liam Collard, Muhammad Fayyaz Kashif, Antonio Balena, Marco Pisanello, Di Zheng, Francesco De Angelis, Marco Grande, Cristian Ciracì, Massimo De Vittorio, and Ferruccio Pisanello

JTu4A.2 Optics and the Brain (BRAIN) 2023 View: PDF

Intravital Longitudinal Visualization of Pancreatic Ductal Adenocarcinoma Tumor Microenvironment

Stephani Edwina Lucia, Jehwi Jeon, Jieun Choi, and Pilhan Kim

JTu4B.11 Optics and the Brain (BRAIN) 2023 View: PDF

Improved Sensitivity and Imaging Speeds of Fluorescent Imaging Using Silicon Photomultipliers

Michael G. Giacomelli

JTu4B.13 Optics and the Brain (BRAIN) 2023 View: PDF

Reconfigurable Transient Ultrasound Light Waveguiding with a Linear Ultrasonic Array

Maxim N. Cherkashin, Volodymyr Rohovets, Carsten Brenner, Georg Schmitz, and Martin R. Hofmann

JTu4B.22 Optics and the Brain (BRAIN) 2023 View: PDF

Design And Simulation of Lithium Niobate Thin Film Ridge Waveguide for Integrated Optics Applications

Dismas Choge K. and David W. Waswa

JTu4B.3 Optics and the Brain (BRAIN) 2023 View: PDF

Measuring brain function during motor imitation with high-density diffuse optical tomography (HD-DOT)

Tessa G. George, Dalin Yang, Kelsey T. King, Sophia R. McMorrow, Chloe M. Sobolewski, Bahar Tunçgenç, Mary Beth Nebel, Natasha M. Marrus, Stewart H. Mostofsky, and Adam T. Eggebrecht

JW2A.1 Optics and the Brain (BRAIN) 2023 View: PDF

Measurements of slow tissue dynamics with short-separation speckle contrast optical spectroscopy

Bingxue Liu, David A. Boas, and Xiaojun Cheng

JW2A.2 Optics and the Brain (BRAIN) 2023 View: PDF

Breaking new ground in protein detection: Self-supervised machine learning and iSCAT enable label-free detection of single proteins below 10 kDa

Mahyar Dahmardeh, Houman Mirzaalian Dastjerdi, Hisham Mazal, Harald Köstler, and Vahid Sandoghdar

JW2A.3 Optics and the Brain (BRAIN) 2023 View: PDF

In vivo stiffness mapping of the human cornea using high-frequency optical coherence elastography

Xu Feng, Guo-Yang Li, Antoine Ramier, and Seok-Hyun Yun

JW2B.1 Optics and the Brain (BRAIN) 2023 View: PDF

Second harmonic generation transmission matrix microscopy for computational aberration correction

Ye-chan Cho, Jungho Moon, Sungsam Kang, and Wonshik Choi

JW2B.2 Optics and the Brain (BRAIN) 2023 View: PDF

Ultralow Power Refractive Index Tapered Optical Fiber Glucose Sensor

Meimei Lai, Erem Ujah, and Gymama Slaughter

JW2B.3 Optics and the Brain (BRAIN) 2023 View: PDF

Unveiling the 3D Cytoarchitecture of the Human Cerebellum with Multimodal Tomography Using Near-Field Speckles at the Synchrotron

Sara Savatovic, Marie-Christine Zdora, Fabio De Marco, Christos Bikis, Margie Olbinado, Alexander Rack, Bert Müller, Pierre Thibault, and Irene Zanette

JW2B.4 Optics and the Brain (BRAIN) 2023 View: PDF

Intrinsic Stochastic Fluorescence Spectra and Photophysical Parameters of Nucleic Acids under Visible Light Illumination

Ruyi Gong, Luay Almassalha, and Vadim Backman

JW2B.5 Optics and the Brain (BRAIN) 2023 View: PDF